Legionella pneumophila 2300/99 Alcoy (serogroup 1): lpa_03649
Help
Entry
lpa_03649 CDS
T01232
Name
(GenBank) hypothetical protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
lpa
Legionella pneumophila 2300/99 Alcoy (serogroup 1)
Brite
KEGG Orthology (KO) [BR:
lpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
lpa_03649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpa03400
]
lpa_03649
Enzymes [BR:
lpa01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
lpa_03649
DNA repair and recombination proteins [BR:
lpa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
lpa_03649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
ADG25885
LinkDB
All DBs
Position
complement(2931055..2931945)
Genome browser
AA seq
296 aa
AA seq
DB search
MMIEKVEITHPDKMIFSGAQISKSEVAEYYSRIANFILPWVNERPVTLKCYPNGINKEGF
FIKHAPDYFSDSIHRVSIPLKKTDAHIEMIRIDKAEDLVYLVEQNTIELHIPLAKITDVK
KPDQIVLDLDPSDDDFEKVRHAALLLKEILDLLQLPAFIKTTGSRGVHIHIPIKPYYSFL
EIKAITKQIAERLHQQSTDTTTLEQRKNKRGNKVFIDYLRNDYGMTAVAPYSLRALENAP
IATPIDWSELQDNALGPRSYHLKNIFRRLAQKQDPWANFVQSSVAIQCRDIGSNIF
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgatgattgaaaaggttgaaattactcatcctgataagatgatattttctggcgcccaa
atttcaaaaagcgaggtagctgagtattacagccgaatagcaaattttattttaccctgg
gtaaatgaacgaccggtaaccttaaagtgttatcctaatggaatcaataaggaaggtttt
tttataaagcatgcgccagattatttttcagattccattcatcgtgtttctatcccgctg
aaaaaaactgatgcgcatattgaaatgatcaggattgataaagcggaagatctggtttat
ctcgttgagcaaaatacaatagaattgcatatacccttagcaaaaataacggatgttaaa
aaaccggatcaaattgttctggatctggatccgtcagatgatgattttgagaaggtacgg
catgccgctttattgttaaaagaaatcctcgatttgttacaattgcccgcatttataaaa
acgaccggttcacgtggtgtacatattcatattccgataaaaccttactattcttttctt
gaaataaaagccattacaaaacaaatagcagagcgattgcatcagcaatccactgataca
acgactctcgagcaacgcaaaaataaacgcggtaacaaggtatttattgactatttgaga
aatgattatggaatgacagcagttgcaccttattcactaagagcacttgaaaatgcacct
atagcgactccaattgactggagcgaattgcaagacaatgctcttggtccccgcagctat
catttaaaaaatatatttcgtcgccttgcacaaaaacaagatccatgggcgaattttgtg
caaagctctgttgctattcaatgccgggatattgggagcaatattttttaa
DBGET
integrated database retrieval system