Leeuwenhoekiella palythoae: LDL79_02820
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Entry
LDL79_02820 CDS
T07563
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lpal
Leeuwenhoekiella palythoae
Pathway
lpal00521
Streptomycin biosynthesis
lpal00523
Polyketide sugar unit biosynthesis
lpal00541
O-Antigen nucleotide sugar biosynthesis
lpal01100
Metabolic pathways
lpal01110
Biosynthesis of secondary metabolites
lpal01250
Biosynthesis of nucleotide sugars
Module
lpal_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
lpal00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LDL79_02820 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LDL79_02820 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LDL79_02820 (rfbC)
Enzymes [BR:
lpal01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LDL79_02820 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UBZ11060
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All DBs
Position
complement(709476..710006)
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AA seq
176 aa
AA seq
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MQATETALKGCYIIEPRVFKDDRGYFFESFNQKAFEELIGQNVNFVQDNQSFSQYGVIRG
IHFQQGEHAQAKLVRVLAGEVLDVAVDLREDSETYGQHVAVKLTAANHKQLFVPRGFGHG
FAVLSKTAVFAYKCDNYYHKASEGGIVYNDPRLAIEWGIPEGKVEVSDKDKILDFF
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaacagaaacagcattaaagggctgctatattatagagccgcgggtttttaaa
gacgatcgcggctatttttttgaaagttttaatcaaaaggcttttgaagagctcataggg
caaaacgtaaattttgtacaggataaccagtctttttctcaatatggcgtaatccgtggg
atccattttcaacagggcgaacacgcccaagccaaactcgttcgggtattggcgggagaa
gtgctggatgttgctgtagatttacgtgaagattcagaaacctacgggcagcacgtggcg
gtaaagcttaccgcagcgaatcacaaacaactctttgtgcctcgaggctttggtcatggg
tttgcagtattgagcaaaactgcagtctttgcttataaatgtgataattattaccacaaa
gcttctgaagggggcattgtgtataatgacccaagattagctattgaatggggtattcca
gaaggcaaggtggaggtatctgataaagataaaattttagattttttttag
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