Leishmania panamensis: LPMP_241340
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Entry
LPMP_241340 CDS
T06539
Name
(RefSeq) histone deacetylase, putative
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
lpan
Leishmania panamensis
Pathway
lpan03082
ATP-dependent chromatin remodeling
lpan03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
LPMP_241340
03083 Polycomb repressive complex
LPMP_241340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lpan03036
]
LPMP_241340
Enzymes [BR:
lpan01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
LPMP_241340
Chromosome and associated proteins [BR:
lpan03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
LPMP_241340
HDAC complexes
Sin3A-HDAC complex
LPMP_241340
BRAF-HDAC complex
LPMP_241340
REST complex
LPMP_241340
SHIP complex
LPMP_241340
MiDAC complex
LPMP_241340
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
LPMP_241340
Heterochromatin formation proteins
Other heterochromatin formation proteins
LPMP_241340
Chromatin remodeling factors
NuRD complex
LPMP_241340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
22575543
NCBI-ProteinID:
XP_010699474
UniProt:
A0A088RRN5
LinkDB
All DBs
Position
24:481754..483055
Genome browser
AA seq
433 aa
AA seq
DB search
MRPSRVRALHALVHSLGLDDAECMTVCHARPATAEEMGTFHRGAYLECLRQAPVICGNPL
DEMSLAFQKEFDVPFASQEGDCPLFPEVWSLVSSQAGASLACAEALLRGDATVAMNWAGG
MHHAAAAHASGFCFVNDIVLCIRRLLRHYQRVLYIDLDVHHGDGVEGAFYGNHRVMTLSL
HQFGNGFFPGTGDYPTRETADSFAINVPLPTRTGDAAYLLSFRTALSSVVQCFDPEAMVV
QCGADTIVGDLIGRLCVTTLAHTQCVANVLSFERPTVLLGGGGYHVFHTARCWAIHTATA
LGRTAAQLPLYIPRTDPYYMDYRQECTPKRPTLHVFLDPDVDDPLPLGDSLAFWRQLCLS
IQWQMRTARLVRQGFSRTVQLCRQRRAALLRQFASQEAGKESGVGVSGPKRPRSAATTDR
SGEEGAEDRVFSG
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccgtctcgtgtgcgtgcgctgcacgcgcttgttcattccttgggcctcgacgat
gcagagtgtatgacggtgtgccatgctcgtccggcaacggcagaggagatggggacgttt
caccgcggcgcatacttggagtgtctgcggcaggcgccggtcatttgcgggaatccgctg
gacgagatgtccctcgcctttcagaaggaatttgacgtcccgttcgcgtctcaggagggc
gactgtcctctcttcccggaggtatggtcgctggtgtccagccaagctggtgcctcgctt
gcctgtgcagaggccctcttgcgcggcgatgctacagtggcgatgaactgggccggcggc
atgcatcacgccgctgctgcccacgcaagcgggttctgctttgtgaatgacattgtgctg
tgcatccgccggcttctgcggcactaccagcgcgttctctacattgacctggatgtgcat
cacggggacggcgtggagggggccttttatggcaatcaccgcgtgatgacactctcgctt
caccagttcggcaacggctttttccccggcaccggcgactatccaacacgtgagacagct
gacagcttcgctatcaacgtcccactacccacgcggacgggagacgccgcttacctctta
tctttccgcactgcactgtccagcgtggttcagtgtttcgatccggaggcgatggtcgtg
cagtgcggcgccgacaccatagtaggcgacctcattgggcgactttgcgtgactacgttg
gcgcacacgcagtgtgtggccaatgtgctgtcatttgagcgaccgacggtactgcttgga
ggaggcggttaccacgtgttccacacggcccgctgctgggcgatccacaccgccaccgcg
cttggtcgcacagccgcacagctacccttgtacatcccgcgcacggacccctactacatg
gattaccggcaagaatgcacgccaaagcggccgacgctgcacgtatttctcgaccctgac
gttgatgacccactgccgctgggggacagcttggcgttctggcgtcaactgtgtctcagc
atccagtggcagatgcgcactgcccgccttgtgaggcaagggttttctcgcacagtacag
ctttgccggcagagacgggcagcgttgctgcggcagttcgcctcgcaagaggcagggaaa
gaatctggtgtcggtgttagcggtcctaagcgcccccgctcagcagctacaacggaccgc
agtggcgaggagggggcggaggacagagtgttctcggggtga
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