Leishmania panamensis: LPMP_241650
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Entry
LPMP_241650 CDS
T06539
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
lpan
Leishmania panamensis
Pathway
lpan03022
Basal transcription factors
lpan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lpan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LPMP_241650
09124 Replication and repair
03420 Nucleotide excision repair
LPMP_241650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpan03021
]
LPMP_241650
03400 DNA repair and recombination proteins [BR:
lpan03400
]
LPMP_241650
Transcription machinery [BR:
lpan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LPMP_241650
DNA repair and recombination proteins [BR:
lpan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LPMP_241650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
Rubredoxin_2
EBV-NA3
Motif
Other DBs
NCBI-GeneID:
22575574
NCBI-ProteinID:
XP_010699504
UniProt:
A0A088RRQ4
LinkDB
All DBs
Position
24:complement(622623..623939)
Genome browser
AA seq
438 aa
AA seq
DB search
MLRTVLLLDGSDAMNSSSDYLPNYLLAMRPPLLRLVEGYLDSTPLASLGVVVMRDGISHR
LLPCTTNHNEIVDVLERDVFLHGGSGNTSMENGLRMAMSELVDMREVAALVSTAAKKSSS
IAAVNPRSAWKGSATQLNVIVLTASVTLIDPTDVFAVVNVMAALSIRINVVSLVGAVHVF
DVCTAETGGTLYCPLNYGHLLHIVDELSAATSLVRNKKHQRGGRRQRVKRSREESDDVKA
DDDDNEIPHLIPIGCPVYLEAPPSNNAGSSSTASSRSFYLACPQCHLIQLSIPTTCSMCR
LLLCNAPMLYSTFVSHNSLVPPAKSLRVVRGTSVPAPIITTLSAAPVPTIQNDGVVKTTT
QQPVRCDLCMTNILAKAMVSHIRSGGVGSPVASSAAAASVVDESLVWQCSACASYRCNAC
NDFVLRKIGLCPYCLALQ
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcactgttctgctcctcgatggcagcgatgccatgaacagtagctcagactac
ctgcccaactatctgcttgccatgaggccaccactgctgcggttagtggaggggtatctg
gactctacaccactcgcgtcccttggcgtggtggtgatgcgagacggcattagccaccgc
ctactgccgtgcaccacgaaccacaacgagatcgtcgacgtgctggagcgcgacgtcttt
ctgcacgggggctctggcaacacctcaatggagaacgggctgcggatggccatgtcggag
ctggtggatatgcgcgaggtagccgccctggtgtcaaccgcggccaaaaagtcgtcgtcg
attgccgctgtcaacccgcgctcagcgtggaagggatcagcaacgcagctcaacgtcatt
gtattgacagcctcggtcacactgattgaccccacagacgttttcgccgtcgtgaacgtc
atggccgctttgtccatccgcattaatgtcgtctccctcgtcggtgcggtgcacgtcttt
gacgtgtgcaccgccgaaacaggagggacgctgtattgccccctcaactacggtcacctg
ctgcacatcgtagacgagctgtcggcggccacctcgctggtgcgaaacaagaagcaccag
cgaggtggccgccgacagcgagtcaagcggtctcgcgaagaaagtgacgatgtcaaggct
gatgacgatgataatgagataccgcatcttatacctatcggatgccccgtgtatctcgag
gcaccaccatccaacaacgcagggtcgtcatccaccgcctcctcccgctccttctacttg
gcatgcccccagtgtcatctcatccaactctctattcccacaacctgctccatgtgccgc
ctgttgctgtgcaatgcgccgatgctgtacagcacgtttgtgtcgcacaactctctggtg
ccaccggcaaagtcgctccgcgtggtacgtggcacatcggtgcccgcgccgattattacc
accttgagcgctgccccagtgcccaccatccaaaacgacggcgtcgtcaaaacaacgacg
cagcagccagtacggtgcgacctctgcatgaccaacatcctagccaaggcaatggtgtcg
cacatacgctctggcggagtcggtagtcccgtcgcctcgtcagcggcagcggcctcggtg
gtggatgagtcgctggtgtggcagtgcagcgcgtgtgcctcgtaccgttgcaacgcctgc
aacgactttgtcctccgcaaaatcggcctctgtccctattgcctggccctgcagtga
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