KEGG   Leishmania panamensis: LPMP_241650
Entry
LPMP_241650       CDS       T06539                                 
Name
(RefSeq) hypothetical protein
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
lpan  Leishmania panamensis
Pathway
lpan03022  Basal transcription factors
lpan03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lpan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    LPMP_241650
  09124 Replication and repair
   03420 Nucleotide excision repair
    LPMP_241650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lpan03021]
    LPMP_241650
   03400 DNA repair and recombination proteins [BR:lpan03400]
    LPMP_241650
Transcription machinery [BR:lpan03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     LPMP_241650
DNA repair and recombination proteins [BR:lpan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     LPMP_241650
SSDB
Motif
Pfam: Ssl1 VWA_2 Rubredoxin_2 EBV-NA3
Other DBs
NCBI-GeneID: 22575574
NCBI-ProteinID: XP_010699504
UniProt: A0A088RRQ4
LinkDB
Position
24:complement(622623..623939)
AA seq 438 aa
MLRTVLLLDGSDAMNSSSDYLPNYLLAMRPPLLRLVEGYLDSTPLASLGVVVMRDGISHR
LLPCTTNHNEIVDVLERDVFLHGGSGNTSMENGLRMAMSELVDMREVAALVSTAAKKSSS
IAAVNPRSAWKGSATQLNVIVLTASVTLIDPTDVFAVVNVMAALSIRINVVSLVGAVHVF
DVCTAETGGTLYCPLNYGHLLHIVDELSAATSLVRNKKHQRGGRRQRVKRSREESDDVKA
DDDDNEIPHLIPIGCPVYLEAPPSNNAGSSSTASSRSFYLACPQCHLIQLSIPTTCSMCR
LLLCNAPMLYSTFVSHNSLVPPAKSLRVVRGTSVPAPIITTLSAAPVPTIQNDGVVKTTT
QQPVRCDLCMTNILAKAMVSHIRSGGVGSPVASSAAAASVVDESLVWQCSACASYRCNAC
NDFVLRKIGLCPYCLALQ
NT seq 1317 nt   +upstreamnt  +downstreamnt
atgctgcgcactgttctgctcctcgatggcagcgatgccatgaacagtagctcagactac
ctgcccaactatctgcttgccatgaggccaccactgctgcggttagtggaggggtatctg
gactctacaccactcgcgtcccttggcgtggtggtgatgcgagacggcattagccaccgc
ctactgccgtgcaccacgaaccacaacgagatcgtcgacgtgctggagcgcgacgtcttt
ctgcacgggggctctggcaacacctcaatggagaacgggctgcggatggccatgtcggag
ctggtggatatgcgcgaggtagccgccctggtgtcaaccgcggccaaaaagtcgtcgtcg
attgccgctgtcaacccgcgctcagcgtggaagggatcagcaacgcagctcaacgtcatt
gtattgacagcctcggtcacactgattgaccccacagacgttttcgccgtcgtgaacgtc
atggccgctttgtccatccgcattaatgtcgtctccctcgtcggtgcggtgcacgtcttt
gacgtgtgcaccgccgaaacaggagggacgctgtattgccccctcaactacggtcacctg
ctgcacatcgtagacgagctgtcggcggccacctcgctggtgcgaaacaagaagcaccag
cgaggtggccgccgacagcgagtcaagcggtctcgcgaagaaagtgacgatgtcaaggct
gatgacgatgataatgagataccgcatcttatacctatcggatgccccgtgtatctcgag
gcaccaccatccaacaacgcagggtcgtcatccaccgcctcctcccgctccttctacttg
gcatgcccccagtgtcatctcatccaactctctattcccacaacctgctccatgtgccgc
ctgttgctgtgcaatgcgccgatgctgtacagcacgtttgtgtcgcacaactctctggtg
ccaccggcaaagtcgctccgcgtggtacgtggcacatcggtgcccgcgccgattattacc
accttgagcgctgccccagtgcccaccatccaaaacgacggcgtcgtcaaaacaacgacg
cagcagccagtacggtgcgacctctgcatgaccaacatcctagccaaggcaatggtgtcg
cacatacgctctggcggagtcggtagtcccgtcgcctcgtcagcggcagcggcctcggtg
gtggatgagtcgctggtgtggcagtgcagcgcgtgtgcctcgtaccgttgcaacgcctgc
aacgactttgtcctccgcaaaatcggcctctgtccctattgcctggccctgcagtga

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