KEGG   Leishmania panamensis: LPMP_303410
Entry
LPMP_303410       CDS       T06539                                 
Name
(RefSeq) DNA ligase I, putative
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
lpan  Leishmania panamensis
Pathway
lpan03030  DNA replication
lpan03410  Base excision repair
lpan03420  Nucleotide excision repair
lpan03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lpan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LPMP_303410
   03410 Base excision repair
    LPMP_303410
   03420 Nucleotide excision repair
    LPMP_303410
   03430 Mismatch repair
    LPMP_303410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lpan03032]
    LPMP_303410
   03400 DNA repair and recombination proteins [BR:lpan03400]
    LPMP_303410
Enzymes [BR:lpan01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     LPMP_303410
    6.5.1.6  DNA ligase (ATP or NAD+)
     LPMP_303410
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     LPMP_303410
DNA replication proteins [BR:lpan03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    LPMP_303410
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     LPMP_303410
DNA repair and recombination proteins [BR:lpan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     LPMP_303410
   NER (nucleotide excision repair)
    Other NER factors
     LPMP_303410
   MMR (mismatch excision repair)
    Other MMR factors
     LPMP_303410
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-GeneID: 22577394
NCBI-ProteinID: XP_010701363
UniProt: A0A088RWL9
LinkDB
Position
30:1225779..1228109
AA seq 776 aa
MHQTTLDRLFVPVASVGGSNEADNSRKATKKVTTASNREDRKRPREEEKVASQCVSSTPT
SDTATGRRTRWNEPTNAYYAQHVAEYKALIANVPPPTATSMAKLFQESTFDPVTTFESVW
LPPRAPAALPTAGALEPVPFAAVVDVLADISATGSRLECLKQLTFLLLAVIERCPEDLVP
VMYLVINKHAPQHEGVELGIGDAVLVKAVAECCGMTESRTKEEYRQSGDLAEIAQMHKQK
QSTLMKPKALSARSVFKSYREIAMMSGKDVVRRRSDLIKGLLRDAQGPEVNLIVRGLQQK
MRIGLAEPSALAAVGYAFALHFVGSAQMHTMSEVQLQTLLNSGADSLARIFYEVPSLDVV
LSAVLASGFMILVPGSCIAKVHAKELSIRPGLPVKPQLAHPTSGITVILDRLQGKKFTSE
YKYDGERAQIHYSKDNGFHIFSRNSETHTGKYPDVIAILPNTFDAAEVQSFIIDAEVVAV
HPETGALQAFQVLQHRGRKNIAEKDVSISVCLFVFDLLYLNGEPQLNKTLQQRRELLWRY
IRPLPAKLCFAAYLDSDDVEDVQKFLEKSIADGCEGLMVKTLEEEATYTPAKRSHYWLKL
KKDYMDGVTDTLDLVPIAAFYGKGKRTGVFGGFLLACYDPKADEYQSICKIGTGFQDEEL
EKLTQSLKPFVVHDKPRYYRAGGEEPDVWLTEAQVWEVKAADLSVSPVHQAAVGLVDPNK
GIALRFPRYVRQREDKNPVDATNTQQVAEMYKAQSLAVQHDASGDAEWAVTRTETP
NT seq 2331 nt   +upstreamnt  +downstreamnt
atgcatcaaaccaccctcgaccgcctctttgtgcctgtggcctcagtgggtgggtcgaac
gaggccgacaattcgcgtaaggcaacaaaaaaggtaactaccgcttcaaatcgagaagat
cgaaagcggccccgcgaggaggaaaaggtggcgagtcaatgcgtatcaagcactccgacc
tcggacaccgccactggtcggcggacaaggtggaatgagccgacgaatgcctactatgca
caacacgttgcagagtacaaggcgctgatcgccaatgtgccgccgcccacggcgacgtcc
atggcgaagctcttccaggagtccaccttcgatcctgtgacgacattcgagtcagtgtgg
ctgcctccccgggctcctgccgcgctgccgaccgctggtgcattggagccggtgccgttt
gcagcagtagtcgacgtactggcagatattagcgccaccggctcgcggcttgagtgctta
aagcagctcacctttttgcttctcgccgtaatcgaacgatgcccagaggatttggtgccg
gtgatgtacctggtgatcaacaagcacgcaccgcagcacgaaggcgtggagctaggcatt
ggggatgcggtactggtgaaggcggtagctgagtgctgcggcatgacggaatcccgcacc
aaggaagagtaccggcaaagcggcgatttggcagaaatcgcgcagatgcacaagcagaag
caaagcacactgatgaagccgaaggcgctctccgcgcggagcgtgttcaagtcgtacagg
gagatcgcgatgatgagcggcaaggatgtggtgcggcggcggtcagacttgatcaagggg
ctgctgcgtgacgcacaggggccggaggtgaacctgattgtgcgcgggctgcagcagaaa
atgcgcatcggccttgccgagccgtccgccttggcagccgtcgggtacgcctttgctctt
cacttcgtcggtagcgcgcaaatgcacaccatgagtgaggtgcagctccagacgctgctg
aactccggggccgacagcctcgctcgtatcttctacgaggtgccgagtctagacgtggtg
ctgagcgcggtcctagcgagcggcttcatgattttggtgcccggtagctgcatcgcgaaa
gtgcacgccaaggagctgtcgattcggcctgggctgccggtgaagcctcagctggcgcac
ccgacaagcggcatcaccgtcatcctggaccgtctgcaaggcaaaaagttcacgtcggag
tacaagtacgacggagagcgcgcccaaattcactacagcaaggataacggcttccatatc
ttttcccgcaactccgagacacacactggcaagtaccctgacgtcatcgcgatattacca
aacacctttgacgctgccgaggtacagtctttcattatcgacgcggaggtagtggcggtg
catccggagaccggggccctgcaagccttccaggtgctgcagcatcgaggtcgaaagaac
attgcggagaaagatgttagcatttcggtctgcttgttcgtgtttgacctattgtacttg
aacggagagccgcagctgaataagacactgcagcagcgccgggagttgctctggcgctac
atccgtcctctcccagcaaagctgtgttttgcagcgtacttggactctgacgacgtcgag
gacgtgcaaaagttcttagagaaatccattgcggatggctgcgaaggactaatggtgaag
acgctcgaggaggaggccacctacacccctgccaaacgctcgcactactggctaaagctg
aagaaggactacatggacggcgtcaccgatacgctggatctcgttcccatcgccgctttc
tatggcaagggcaagcgaactggcgtgtttggcggtttcctgctcgcgtgctacgatccg
aaggcggacgagtaccaaagcatctgcaaaattggtactggtttccaggacgaagagctg
gagaagctcacacaatcactaaagcccttcgtggtacacgataagccgcgctactaccgc
gcaggtggagaagagccggacgtgtggctcactgaggcgcaagtgtgggaggtgaaggcg
gcggacttgtcagtgtcgccagtgcaccaggcggccgtggggcttgttgaccccaacaaa
ggcattgcgctgcgcttcccccgctacgtgcgacagcgcgaggacaaaaaccctgtggac
gcgacgaacacgcagcaggtggctgagatgtacaaggcgcagtccttggcagtgcaacac
gacgcgagcggtgatgctgagtgggctgtcacacggacagagacgccctga

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