Limosilactobacillus panis: KZE55_03645
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Entry
KZE55_03645 CDS
T07939
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lpas
Limosilactobacillus panis
Brite
KEGG Orthology (KO) [BR:
lpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpas03019
]
KZE55_03645
03009 Ribosome biogenesis [BR:
lpas03009
]
KZE55_03645
Enzymes [BR:
lpas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KZE55_03645
Messenger RNA biogenesis [BR:
lpas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KZE55_03645
Ribosome biogenesis [BR:
lpas03009
]
Prokaryotic type
rRNA helicases
KZE55_03645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
KdpD
DUF6305
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QZN93651
LinkDB
All DBs
Position
786105..787478
Genome browser
AA seq
457 aa
AA seq
DB search
MSDKTFNDFNLKPYLVMAVTAINFHTPTTVQERVIPEIMKGKSVVGQSATGSGKTHAFLL
PIFSRIQEGDQSVQAVITTPSRELAYQIYNAAKQLNKFADQPLTIHNYVGGTDKQHQIDQ
LERKQPQLVIGTPGRILDLIKSQFLDIHTATMFVVDEADMTLDMGFLEPVDQIASHFPED
LQMMVFSATIPQKLRPFLKKYMKNPVMEEIPTATVINPDVENWLMSTKGKNKNQLIYRLL
TLGEPYLALVFANTKERVEELTRYLSEQGLKVAMIHGGLEPRRRKRTMRQIRNLDFQYVV
ATDLAARGIDIDGVSLVINDDLPTDLEYFVHRVGRTGRNGMKGIAITLYEPAEDDLIAKL
EDRGITFVPKELKGGRIVTTHDRNRRKKFKHRKEELDPSMKSYVKKAKRKVKPGYKKRIK
RAIKEDEQQKRKLEMRHKMRKVKRQRQRQHRRERNGR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataaaacatttaacgactttaatttgaaaccctacctggtcatggccgttacg
gctattaattttcataccccgacaactgttcaggaacgggtgatcccggaaattatgaag
gggaagagtgtcgtcggtcagtcggcgaccgggagcgggaaaactcacgcctttctcttg
ccgatcttttcacggattcaagaaggcgaccaaagtgtccaggcagtgatcaccacccct
agtcgtgagttagcttaccagatctacaatgccgccaagcagctaaataagtttgctgac
cagccgttgacaattcacaactatgttgggggtacggataagcagcaccagattgaccaa
ttggagcgtaagcaaccacaactagtgattgggacgccaggtcggatacttgacctgatt
aagtcccagttccttgatatccacacagcgacgatgttcgtggttgatgaagctgatatg
acccttgatatgggattcttggagccggttgaccaaattgctagtcactttccagaagac
ctccagatgatggtcttttcggcaacgattccccaaaagctacggccatttttgaaaaag
tacatgaaaaatccagtgatggaagaaattccgaccgcgacggtgatcaatcccgatgtt
gagaactggttaatgtctaccaagggaaagaataagaaccagctgatctatcgtctcttg
acccttggtgaaccttatctggcgctggtatttgctaacacgaaggaacgggtggaagaa
ttaacccggtacctgagtgagcagggcctaaaggtggcaatgattcatgggggccttgag
ccccgacggcgaaagcggaccatgcgacagattcgtaacctcgacttccagtatgttgtg
gcgaccgacctggcggcccgcggaatcgatattgacggggtctccttggtgatcaatgac
gacctgccaactgatctagagtactttgttcaccgggttggccggacgggccgaaacggg
atgaagggaatcgcaattaccctttacgagcccgccgaagacgacctaattgctaagctg
gaagatcgtgggatcacctttgttcctaaagaattaaagggtggtcgcattgtcacgacc
cacgaccggaaccggcgcaaaaagtttaagcaccggaaagaagaacttgatccgtccatg
aagagctatgtcaagaaggccaagcggaaagtcaagccgggctacaagaaacggatcaag
cgggcaatcaaagaggatgaacagcaaaagcggaagcttgagatgcgtcacaagatgcgg
aaggttaaacggcagcgacaacgtcaacaccgccgggagcgaaacggccgttga
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