Lacipirellula parvula: PLANPX_4038
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Entry
PLANPX_4038 CDS
T06590
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lpav
Lacipirellula parvula
Pathway
lpav00521
Streptomycin biosynthesis
lpav00523
Polyketide sugar unit biosynthesis
lpav00541
O-Antigen nucleotide sugar biosynthesis
lpav01100
Metabolic pathways
lpav01110
Biosynthesis of secondary metabolites
lpav01250
Biosynthesis of nucleotide sugars
Module
lpav_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
lpav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PLANPX_4038
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PLANPX_4038
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PLANPX_4038
Enzymes [BR:
lpav01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PLANPX_4038
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BBO34426
UniProt:
A0A5K7XJ64
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Position
complement(4517977..4518543)
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AA seq
188 aa
AA seq
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MDIYGTAIEGPLVIEPTVFRDDRGFFIESFHEAKFQSAGLEHTFVQDGHSRSKRRTLRGL
HYQNPYPQGKLVSVIRGEIFDVAVDLRRASPTFGRWAGFYLSEDNHRFLYIPPGFAHGFC
VTSNVADVTYKCTDFYPAGSEHSIAWNDPQLAIDWPVRNPILSPKDQSAALLAESYCFGD
ATATMMTV
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggatatctatggtacagcgatcgaagggccgctagttattgagccgaccgtgttcagg
gatgacagagggttcttcattgaatcatttcacgaggcaaaatttcaatccgccggcctg
gagcatacttttgtgcaggacgggcattcccgatcgaagcggcggacactgcgcggcctc
cactatcaaaatccatatccgcaaggaaaactcgtctcagtgattcgtggagaaatcttc
gatgtggcggttgacctgcgtcgcgcctctccgacgttcgggcggtgggctgggttttat
ttgagcgaagacaatcaccggttcttgtacattccgccgggcttcgcacatggattctgc
gtcaccagcaatgtcgcagacgttacctataaatgcactgacttctaccccgctggcagc
gaacattcgattgcgtggaacgacccgcaactcgccatcgactggcctgttcggaatccg
attctttcgccgaaagatcagtcggcggccttgctggcggaatcttattgtttcggcgac
gcgactgcgacgatgatgaccgtctag
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