Lolium perenne (perennial ryegrass): 127296234
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Entry
127296234 CDS
T08650
Name
(RefSeq) nuclear pore complex protein NUP133
KO
K14300
nuclear pore complex protein Nup133
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127296234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127296234
03036 Chromosome and associated proteins [BR:
lper03036
]
127296234
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127296234
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127296234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
127296234
NCBI-ProteinID:
XP_051182229
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Position
4:265076838..265083515
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AA seq
1294 aa
AA seq
DB search
MFSPAIRKPHLVHRREREEATPSPPPPAPAHSPSPGGFALSNRPATGTPAPWTSSSLLAR
ISTSKQTDRAGDSDQIQPVRVAEFPQIVRNAQASLLQKNFSGKNTLVGGIDKETSLAWMI
CGNELYIWSYLSSVSKDCLVLDVPSSLMGNKDTESLCGNQWTLCIMRWGSSTATRKSEEM
LHRRSSTGVILCNRRTQAIAYWPDIYDESSKSPALSLFDHSVTSPSDGISACYRFNSLIA
TSIPGGIRECIAIASEPTGALWLFQCSPAGILRREVHRDTLGDNGTDHHQRNDGGRSLAW
LPSDISSEAADRKFFLLTNHGIQCWSISLLHGNNVKKLLSQEIVGTDGELGIKRDIAGQK
NIWLLDMQIDEHGKEFSILVATLCKDRVSGSNYTQYSLLTMLYKSNQKFSSEDNVAKCER
FLEKKAPSQVIIPKARVEDEDFLFSMRLKSGGKPSGSVIILSGDGTATVAIYWRGSTRLY
QFDLPWDAGKVLDASIIPSAEDRDEGAWVVLTEKAGVWAIPEKAVLVGGVEPPERSLSRK
GSCNEAVAEEKRRSQAFSASVVPRRVSSEAWSSGDRQRPAFTGIAQQVVVDEEAEMLLNR
LFHDFILSGAVHEALQKLRVAGAFEKEGEMNVFVRVSKSIVNTLSKHWTTTREAEFLAST
IVSSLSEKRQKHEKFLQFLVVSKCHEELSSKHRAAMLSVMEHGEKLSGVIQLRELQNALI
QQRSSTHLSPQSKTPTAGALWNLIQLVGEKARRNTVLLMDRDNAEVFYSRVSDIEDLFYC
LSHQLRYIITGEEHPSVQMQHALELSNACVTLVQAALYYREEHKDWYPSPEGLITWNSQP
VVRSGIWTLASSVMELLREPGAADMPMKSNLWSQLEGLTDMLLEGYMGLLTAKFERGEEH
GGLVQEYCERRDELLGSLYDLAKQIIEAKYQESREGNDNLDLKESIFREVTSPILATAKR
HEGYQTLWQICYDISDTVLLRNLMHDSVGPHGGFSFYVFKQLINNGQHAKLLRLGEEFQE
ELASFLKDRKDLLWLHEIFLNQFSTASETLHTCALRLSSGEDADLTSNRKSMSFVERRRL
LYLSKIAATAGKDVDYEMKVARIDADIRILKLQEEIVQHDPEYAQGKYTGKLLRPSELIE
MCMKGDRELSLKAFEVFAWTSSSFRSSNRGLLENCWTNAANQDDWVQLSQASISEGWSDE
VTQESLQGTALFNASRLCYSQDAVVFDGTFEEVLPVRKEDVYARGVESKCFSVEEVLMQH
DVFPDAGKLMMTAVVMGKELSYTEPADEPVEMDS
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgccggcgatcaggaagccccacctcgtccaccgcagggagagagaggaggcg
acgccttcaccaccacctcctgctcccgcccactccccatcgcctggtggatttgcgctc
tccaatcgccccgccaccggcaccccggccccatggacctcctcctccctcctcgccagg
atttcgacatccaagcaaacagacagggctggcgattctgaccagatccaaccagtgcgt
gtagcagagttcccccaaatcgtgaggaatgcacaagccagccttctgcagaagaatttt
tctggcaaaaacacgcttgtaggtggcattgacaaagaaacatcgcttgcatggatgata
tgtggaaatgagctttatatctggagctacttgtcttctgtttccaaagattgtcttgta
ctcgatgtcccgtcttctcttatgggaaacaaagacacagagtccctctgtggtaatcag
tggacgctttgcatcatgagatggggtagtagtactgcaacaaggaagagtgaagaaatg
ttgcatcgaagaagttcgaccggtgttatcctctgcaacagaagaacacaagctattgct
tattggcctgatatctatgatgaaagtagcaagagtccagctcttagtttatttgaccac
agtgtcacatctccaagtgatggtatatctgcatgttacaggtttaactcgctaattgca
acttccattccaggaggcattcgtgaatgtattgcgatagcttctgagccaacaggcgct
ttatggttgtttcagtgttcaccggcagggattcttcgaagagaagttcatcgtgataca
ttaggagataatggtactgaccatcatcagagaaatgacggtggaagatccctggcttgg
ctaccaagtgacatatcatcggaggctgctgaccggaaattctttttgttgactaaccat
gggatacaatgttggagcatctcactcttgcatggcaacaatgtaaagaaattattatct
caggaaattgttggtactgatggggagctgggcataaaaagggacatagctggtcagaag
aacatttggcttttggacatgcagatagatgagcatgggaaggagttcagcattcttgtc
gctaccttgtgcaaagatcgggttagcgggtcaaactacactcagtattctcttctgaca
atgctgtacaaatcaaaccaaaagttctcatctgaagataatgtggctaaatgtgaaagg
tttttggagaaaaaagctccttctcaggtgataatccctaaagctcgagtggaggatgaa
gattttttgttctccatgaggcttaaaagtggtggtaaaccttctggttcagtgatcatc
ctatcaggtgatggaacagcaacggtggccatctattggagaggttctacccgactctat
caatttgatctgccttgggatgctggaaaggttttggatgcttccatcatcccatctgct
gaggacagagatgaaggagcttgggttgttctgacagaaaaggcaggagtctgggcaata
cctgaaaaggctgtattagttggtggggttgagcctccagagcgcagcttatcacgaaaa
ggtagctgtaatgaagcggttgctgaagagaaaaggagaagtcaggcattcagcgccagc
gttgttcccagaagagttagctctgaggcttggagttctggtgaccggcaaaggccagca
ttcactggcatagcccaacaggttgtggttgatgaagaggctgagatgttactcaatcga
ttgtttcatgattttattttgtctggcgcagttcatgaggcacttcaaaagcttagagtc
gcaggagcatttgagaaagagggtgagatgaatgtatttgttcgagtaagcaaatccatt
gtaaacacattatctaagcactggacaactactagagaagctgaatttcttgcttcaaca
attgtttcatccctttccgagaagaggcaaaaacatgagaagttccttcaatttcttgtc
gtgtccaagtgccacgaagaactctcgtccaaacatagagctgcaatgctaagtgtcatg
gaacatggagaaaagctctctggggtgatccagctcagagaattacaaaatgcgcttatc
cagcagcgctcaagcacacacttatcacctcagtccaaaaccccaactgctggtgcactt
tggaatctcattcagttggttggtgagaaagctcgtcggaacactgttctattaatggat
cgtgataatgctgaagtgttctacagtagagtttctgatatagaggatctattttactgt
ttgtcgcatcaacttcggtatattataaccggagaagagcacccatctgttcagatgcaa
catgcacttgagttatcaaatgcttgtgtcactttagttcaggcagcattgtactacaga
gaggagcacaaggattggtatccttctcctgaaggactgataacatggaacagtcagcct
gttgtgcggtctgggatctggactctggcatcatctgtgatggagcttttgagagagcca
ggagctgcagatatgcctatgaaatctaatctatggtctcagctggaaggactcacagat
atgctattggagggatatatgggcctgttaacagccaaatttgaacgtggggaggaacat
ggtgggctagtccaagaatactgtgaaaggagagatgagcttcttggatccctttatgac
cttgcaaaacaaattatagaggcaaaatatcaggagtcaagagaaggcaatgacaatctt
gatctgaaagaatctatatttagagaggttacttctcctattttggcaacagctaaacgg
catgaagggtaccaaacgttgtggcagatttgctatgatatcagtgatacggttctcctc
cgcaatcttatgcatgatagtgtaggacctcatggcggattcagtttctacgtttttaaa
cagctaatcaacaatggacagcacgctaagttgttaaggctgggtgaagaattccaggaa
gagctagctagttttctgaaagaccggaaagatctattgtggcttcacgagatattctta
aatcagttctcaactgcttcagagactcttcatacctgtgctctacgtctgagttccggg
gaagatgctgaccttacaagcaacagaaagtcgatgtcctttgttgaaagaagacgtctt
ctctatctctccaaaattgctgcaacagcaggcaaggatgttgattacgaaatgaaggtt
gcacggatagatgctgatatccggattctaaaacttcaggaagagattgttcagcatgat
ccagaatatgcacagggtaaatatacaggcaagcttcttcgtccatcagaactgatcgag
atgtgcatgaagggagatcgggagctctctctcaaagcttttgaagtgtttgcctggaca
agctcctcattccgaagctccaacagaggcctgctagagaactgctggacgaacgcagcc
aaccaggatgactgggtccagctctcacaggcatccatttcggaagggtggagcgacgag
gtcacccaagaatctcttcaaggaacggccctcttcaacgcctctaggctgtgctatagc
caagacgcggtggtgtttgacggcacatttgaggaggtgctgcctgtgaggaaagaggac
gtgtacgcgagaggcgtggagagcaaatgcttctcggtggaggaagtgctgatgcagcac
gatgttttcccggatgctggtaaactgatgatgacggcagtggtaatgggcaaggagcta
tcgtacactgaaccggcagatgaacctgtggagatggactcgtga
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