Lolium perenne (perennial ryegrass): 127299542
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Entry
127299542 CDS
T08650
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
127299542
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lper01002
]
127299542
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lper04121
]
127299542
Enzymes [BR:
lper01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127299542
Peptidases and inhibitors [BR:
lper01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127299542
Ubiquitin system [BR:
lper04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127299542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
127299542
NCBI-ProteinID:
XP_051185467
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All DBs
Position
5:complement(67371795..67385097)
Genome browser
AA seq
1119 aa
AA seq
DB search
MTMMTPPPLEQQQEDEEMLVPHQELPAADAAQPMEVVAQTEPVNTAESQPPEDPQTSRFT
WTIENFTRLNGKKHYSDVFVVGGFKWRVLIFPKGNNVENLSMYLDVADSGNLPYGWSRYA
HFSLAIVNQIHQKFTTRKDTQHQFNARESDWGFTSFMPLSELYDPSRGYIVNDTVVVEAE
VAVRKMVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMP
SGSIPLALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMK
GTVVEGTIEQLFEGHHINYIECINVDYKSNRKESFYDLQLDVKGCRDVYASFDKYVEVER
LEGDNKYQAEQHGLQDAKKGVLFLDFPPVLQLQLKRFEYDYMRDTMVKINDRYEFPLQLD
LDRDDGKYLTPDADRSIRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTK
EDTKKALEEQYGGEEELPQINPGFNNTPFKFTKYSNAYMLVYIRESDKEKIMCNVDEKDI
AEHLRIRLKKEQEEKEHKKKEKAEAHLYTIIKVARDEDLKEQIGKNIYFDLVDHEKVRSF
RIQKQLPFTSFKEEVAKEYGIPVQSQRFWLWAKRQNHTYRPNRPLAPHEEAQSVGQLREV
SNKAHNAELKLFLEVEVGLDLRPIRPPEKSKEDILLFFKFYNPEKEELRFIGRLFVKALG
KPSDILAILNEMAGFSTNEEIELYEEIKFEPNVMCEHIDKKLTFRSSQLEDGDIVCFQKL
SVPDGDTQVRYPDVPSFLEYVHNRQVVHFRCLEKPKEDEFCLELSKLNTYDDVVERVARQ
LGLDDPSKIRLTSHNCYSQQPKPQPIRYRGVEHLLDMLVHYNQTSDILYYEVLDIPLPEL
QCLKTLKVAFHHATKDEVVIHSIRLPKNSTISDVITDLKTKVELSNPDAELRLLEVFYHK
IYKIFPLQEKIENINDQYWTLRAEEIPEEEKNLAPHDRLIHVYHFMKDPNQNQQIQNFGD
PFLLVIHDGETAAEIMDRVQKKLRVPDEEFSKWKLAFISMNRPEYLQDIDVVSARFQRRD
VYGAWEQYLGLEHTDTTPKRSYTANQNRHTYEKPVKIYN
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgacccctccacctctcgagcagcagcaggaggacgaagagatgctcgtg
ccgcaccaggagctccccgccgccgacgccgcgcagccaatggaagtggtggcccagacg
gagcctgtgaatacggcggagagccagccacccgaggacccgcagacgtcccgcttcacc
tggacgatcgagaacttcaccaggctcaacggcaagaagcactactcggatgtgtttgtc
gttggtggatttaaatggcgtgtgctgattttccctaagggaaataatgtggagaacctt
tccatgtacttggatgttgccgactcggggaacctcccctatgggtggagtcgctacgct
cacttcagcttggccattgtaaaccagatccatcagaagttcaccacacggaaagatact
caacatcagtttaatgcacgtgagagtgactggggctttacatcgtttatgcctttgagt
gagctgtatgacccaagtaggggctatattgtgaatgatactgttgttgttgaggctgag
gttgctgttcgcaaaatggttgactattggacttacgactcaaaaaaggaaacaggttac
gttggtctcaagaatcagggtgctacctgttatatgaactctcttctgcaaactctgtac
catataccatacttccggaaggctgtatatcacatgccaactactgagaatgacatgccg
tctgggagtattcctttagccctgcagagccttttttacaagctccagtatagtgacaac
agcgtagctacgaaagagttgactaaatcttttggatgggacacttatgattctttcatg
caacatgatgtgcaggagctcaacagagttctctgcgagaaacttgaagacaagatgaag
ggaactgttgtggaaggaacaattgaacaactatttgaaggccaccacattaattacatc
gagtgcattaatgttgactataaatctaacagaaaagagtccttttatgatctacaactt
gatgtcaaaggttgtcgtgatgtttatgcatcatttgataaatatgtcgaagtggagcgt
ctagagggtgataacaaatatcaggcggaacaacatggcttacaggatgcaaaaaagggt
gttctctttcttgatttccctcctgttttgcaacttcaactgaagcgttttgaatatgat
tacatgcgggatacaatggttaagattaatgaccgttatgagttcccgctacaacttgat
cttgatagggatgatggaaaatatcttactccagatgctgatagaagtatcagaaacctg
tacactcttcacagtgttcttgttcatagtggaggagtacatggcggtcactactatgct
ttcatacgacctacactctcagaccagtggtataaatttgatgacgagcgagtaacaaaa
gaagatactaaaaaagcgcttgaagagcagtatgggggcgaagaagagttgcctcaaatt
aaccctggtttcaataataccccatttaagttcacaaagtattcaaacgcctacatgctt
gtatatattcgtgaaagtgacaaggagaaaataatgtgtaatgttgatgagaaggacatt
gctgagcatttgaggataaggttgaagaaagaacaagaagagaaagaacataagaagaag
gaaaaggctgaagctcacctctacaccatcataaaggttgcacgagatgaagatttgaag
gagcagattgggaagaatatatattttgatctggtggaccatgaaaaagtccgtagcttc
cgtatacagaagcagttgccctttacttcattcaaggaggaagttgcaaaggaatatggc
attcctgtacagtctcagcgcttctggttgtgggctaagaggcaaaatcatacataccgg
cccaatcgtccgctagcccctcatgaagaagcgcaatcagtggggcaacttagggaggtc
tcaaacaaggcacacaacgctgagctgaagctatttctagaagtagaagtaggattggat
ttgcgcccaattcgtcctcctgagaagagcaaggaagatattttactcttcttcaaattt
tataatcctgaaaaagaagagcttcgttttattggtaggctttttgttaaggctttggga
aagccgtctgatatcctggcaatattgaatgaaatggctggattttccacaaatgaagaa
attgagctctatgaggaaattaagttcgagccaaatgtgatgtgtgaacatattgataag
aaacttactttccgttctagtcagcttgaagatggggacatagtctgtttccaaaagctt
tctgtaccagatggtgatactcaagtgcgctatccagatgttccttctttcttggagtat
gttcataataggcaggtcgtgcacttccgctgtctggagaaaccaaaggaggatgagttt
tgtttggaattgtcgaagcttaatacttatgatgatgttgttgagagagttgcacgtcag
cttggattggacgatccatcaaaaattcggcttacatctcacaattgctattctcaacaa
cctaaaccacagcccatcagatatcgtggagtagagcatctattggatatgcttgtacat
tataatcagacttctgacatactgtattatgaagttctcgacattccactgccagaattg
cagtgtttgaaaacacttaaagttgcatttcaccatgcaacaaaagacgaggttgtgatt
catagcatcagacttccaaaaaatagcaccatcagtgatgtgatcaccgacttgaaaacc
aaggttgaactatccaatcctgacgctgagctccgcttgcttgaagttttctatcacaaa
atttataagatatttccacttcaagaaaagatagagaatataaatgatcagtactggacg
ctacgtgctgaggagattccagaggaggagaagaatctcgctccacatgatcggttgatt
cacgtctatcatttcatgaaagatcctaatcagaaccagcagattcagaatttcggagat
ccttttttgctggtcatccatgatggtgagactgctgcagagataatggaccgtgtgcag
aaaaaactccgggttcctgatgaagagttctccaagtggaagcttgcattcatctccatg
aatcgtccagaatacctccaggatattgatgttgtatctgcacgttttcagaggagagat
gtgtacggagcttgggaacaataccttggcttggagcacactgacactacaccaaaaagg
tcttacaccgccaatcagaaccgacacacgtatgagaagcccgtgaagatttataattga
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integrated database retrieval system
