KEGG   Lolium perenne (perennial ryegrass): 127308943
Entry
127308943         CDS       T08650                                 
Name
(RefSeq) uncharacterized protein LOC127308943
  KO
K12828  splicing factor 3B subunit 1
Organism
lper  Lolium perenne (perennial ryegrass)
Pathway
lper03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lper00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127308943
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lper03041]
    127308943
   03036 Chromosome and associated proteins [BR:lper03036]
    127308943
Spliceosome [BR:lper03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    127308943
 Complex B
    127308943
 Complex C
   U2 SnRNP specific factors
    127308943
Chromosome and associated proteins [BR:lper03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    127308943
SSDB
Motif
Pfam: SF3b1 HEAT_EZ HEAT Cnd1 Htt_N-HEAT_1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N UME IFRD
Other DBs
NCBI-GeneID: 127308943
NCBI-ProteinID: XP_051195838
LinkDB
Position
6:complement(204236733..204241778)
AA seq 1283 aa
MDGIDAELARAQDERRKLEEALAAGAPMAVSSVTFDKDLYGGGASGPDRFAGYDTSIPAS
EDDAPEDDSADPAAANPAARRLASYTGHALAAADIPRSDDDGVPAKRSQRIIDREDDYRR
RRLDRIISPERHDPFAAGEKTPDPSVRTYGDAMRESKVQQEKEHVLREIAKKKREEEEKV
KEKKAAAPEQPPAAAPTKRRNRWDQSQDGDAGVGAKKAKTGSDWDAPDATPGIGRWDATP
GRVGDATPSVRRNRWDETPTPGRMADADATPAAGGITPGATPSGAWDATPKLPGGLVTPT
PKKQRSRWDETPASMGSATPGGTAATPASYTPGATPFGAENLATPTPGHLAHGAVTPEQW
QLMKWERDIEERNRPLTDEELDSMLPQEGYKILEPPASYQPIRTPARKLLATPTPLTTPL
YNIPEENRGQQYDVPREMTGGLPDMKPEDYQYFGPLLDEDNEEQLTPEEQKERKIMKLLF
KVKNGTPPQRKTALRQLTDKAREFGAGPLFNKILPLLMQPTLEDQERHLLVKVIDRVLYK
LDELVRPFVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDE
YVRNTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKICQQIAILMGCAVLPH
LKSLVEIIEHGLSDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKV
LAAFLKAIGFIIPLMDALYASYYTKEVMQVLIREFQSPDEEMKKIVLKVVKQCVSTEGVE
ADYIRSDILPEFFKHFWVRRMALDRRNYKQLVETTVEMANKVGVTGIVGKIVEDLKDESE
PYRRMVMETIEKVVANLGASDIDPRLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNAL
GQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAIVMKQCQEEQLMGHLGVVLYEY
LGEEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGR
IADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNL
KVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEM
GKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNFIWPNIFE
TSPHVINAVMEAIEGMRVALGAAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALV
ASYPALGDDGDNIFSRPELAMFV
NT seq 3852 nt   +upstreamnt  +downstreamnt
atggacggaatcgacgcggagctcgcgcgcgcgcaggacgagcgccggaagctggaggag
gccctggcggcgggcgcgcccatggccgtctcctccgtcaccttcgacaaggacctctac
ggcgggggcgcctcggggcccgaccgattcgccggctacgacacctccatcccggcctcc
gaggacgacgcgcccgaggatgacagcgccgatcccgccgctgccaacccggccgcgcgc
cgcctcgcgtcttacacgggtcacgccctcgccgccgccgacatcccccggtcggacgac
gacggggtccccgccaagaggtcccagcgcatcatcgaccgcgaggacgattaccggcgc
cgccgcctcgaccgcatcatctcgcccgagcgccatgaccccttcgccgccggggagaag
accccggacccctccgtcaggacctacggtgacgccatgcgcgagagcaaggtgcagcag
gagaaggagcacgtgctgcgcgagatcgctaagaagaagagggaggaggaagagaaagtc
aaggagaagaaggctgctgcgcctgagcagccaccagccgctgcgccaacgaagcggcgc
aacaggtgggatcagtcgcaggacggcgatgctggtgttggggccaagaaggcgaagacc
ggctcggactgggatgcacctgacgcaactccggggattggacgctgggatgccacccct
gggcgtgttggagatgccacgccctctgtgaggaggaacaggtgggacgagacgccaact
ccagggaggatggctgatgcagatgcaaccccagcagctggtggcattactccaggagcc
acaccttctggtgcgtgggatgctactcctaagctgcctggtgggcttgtcacaccgacc
cccaagaagcagaggtcgcggtgggatgagacgccggcgagtatggggagtgcaacgcct
ggtggtacggcagcgacgcctgcgtcttacactcctggagcaacgccgtttggagcagaa
aaccttgcgacaccaacacctggccaccttgctcatggtgcggtgaccccggagcagtgg
cagctcatgaagtgggagagggacattgaggagcgcaacaggcctctcactgatgaggag
cttgactccatgctcccgcaggaggggtacaagattcttgaacctccagcttcgtaccag
ccaatacgtactccggcgaggaagctgcttgctacgccaacacctctgaccacaccactt
tataatattccagaggagaatcgtggacagcagtatgatgtgcccagggaaatgactggt
gggttgccagacatgaagccagaagattaccagtactttggaccattgctggatgaggac
aacgaggagcagctaaccccagaggagcagaaggagaggaagatcatgaaacttttgttc
aaggttaagaatggcacgcccccgcagcggaagacagcactccggcagctcacagacaaa
gcacgggaatttggtgctggtcctctgttcaataaaatcctgccattgctcatgcaacca
acacttgaggaccaggagcggcatctcctggtgaaggtcattgatagggtgctgtataaa
ctggatgagctggtccgtccatttgtgcacaagattctggtggttattgaaccactactg
attgatgaggattactatgctcgtgttgagggcagggagattatttcaaacctgagcaaa
gctgctggtcttgctacaatgattgctgccatgagaccagatattgataacattgatgag
tatgtgagaaatacaactgctagggcattcagtgtggttgcttctgctttgggtatccca
gccctccttccattcttgaaggctgtctgtcagagtaagaagtcatggcaagctcggcac
actggtatcaagatctgtcagcagattgctattctcatgggctgcgctgttctgcctcac
cttaagagcctagttgagattattgagcatggtcttagtgatgagaaccagaaagtacgg
acgatcactgccctctctctcgctgcacttgctgaagctgctgcaccctatggtatagaa
agttttgatagtgtgttgaagcctctctggaagggtatcagatctcaccgtggaaaggtt
cttgctgccttcttgaaggctattggtttcatcatacctcttatggatgctctgtatgcc
agttactacactaaggaggtgatgcaagtcctaattagggaattccagtctccagacgaa
gagatgaagaagattgtcctgaaggttgttaaacagtgtgtcagtacagagggtgttgag
gctgattatatccggtctgacatccttccagaattcttcaaacacttctgggttaggagg
atggctctagatcgtaggaactataagcaacttgtggaaacaaccgtggagatggcaaac
aaggtgggagttactggtatcgttggtaagattgtggaggatctgaaagatgaaagtgag
ccttataggagaatggtgatggaaacaattgagaaggtggtggctaatttgggtgcctca
gatattgatcctcgtctggaggagctacttattgatggcatcctgtatgctttccaagag
cagacaagtgatgatgcaaatgtaatgcttaatggttttggagcggttgtgaatgcactt
ggccagagggtcaagccttaccttcctcagatatgtggtaccatcaagtggcggttgaac
aacaagagcgcaaaagttaggcagcaagctgctgatttgatctcaaggatagccattgtg
atgaagcagtgtcaggaggagcagcttatgggtcatctgggtgttgtgctgtatgagtac
ttgggagaggagtatcctgaggtactgggttcaattcttggagctttgaaggctattgtt
aatgtcattggtatgaccaagatgacaccgcctatcaaggatcttctacctcggttgacc
cccatcttgaagaataggcatgagaaggtccaagagaactgcattgatctagttggtagg
attgctgatcgtggagcagaatttgtaccagcaagggagtggatgaggatttgctttgag
ctgctggaaatgttgaaggctcacaagaagggcatcagaagagctactgtgaacacattt
ggttatattgcaaaggcaattgggccacaggatgtgctggccactctgttgaataacttg
aaagtgcaggagcggcagaaccgtgtttgcactactgtagcaattgctattgttgctgaa
acttgctcgcctttcacagttttgcctgccctcatgaatgagtaccgggttccggagctc
aatgtccagaatggtgttttgaaatctctctcatttctctttgagtatattggtgagatg
ggcaaagattacatatatgctgtcactcccttgcttgaagatgctctaatggacagggat
ctagttcaccggcaaactgctgcatctgctgttaaacatatggctctaggggttgctggc
ttgggctgtgaagatgctcttgtccatttgcttaactttatctggcccaatatatttgag
acatctcctcatgtcataaatgctgtcatggaggctattgagggaatgagagttgctcta
ggtgcagctgtggttctgaattattgcctccaaggtcttttccatccagcaaggaaagta
cgtgaagtatattggaagatctacaactcgctatatattggtgcacaagatgcacttgtt
gcttcttatcctgcactgggggatgatggagacaatatcttcagccgtccagagctagcc
atgttcgtctga

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