KEGG   Lytechinus pictus (painted urchin): 129269256
Entry
129269256         CDS       T09066                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 1-like
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
lpic  Lytechinus pictus (painted urchin)
Pathway
lpic03030  DNA replication
lpic03410  Base excision repair
lpic03420  Nucleotide excision repair
lpic03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lpic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    129269256
   03410 Base excision repair
    129269256
   03420 Nucleotide excision repair
    129269256
   03430 Mismatch repair
    129269256
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lpic03032]
    129269256
   03400 DNA repair and recombination proteins [BR:lpic03400]
    129269256
Enzymes [BR:lpic01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     129269256
    6.5.1.6  DNA ligase (ATP or NAD+)
     129269256
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     129269256
DNA replication proteins [BR:lpic03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    129269256
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     129269256
DNA repair and recombination proteins [BR:lpic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     129269256
   NER (nucleotide excision repair)
    Other NER factors
     129269256
   MMR (mismatch excision repair)
    Other MMR factors
     129269256
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 129269256
NCBI-ProteinID: XP_054762704
LinkDB
Position
10:complement(27786234..27807695)
AA seq 810 aa
MRKRDSPPKPVKEESKDLEEEKMEEENIKTEEKTTLKVKEEPTSPTEKKKNDDKSPSKKS
PKPSKVKSLSSDKKSKKSKTESAKKEKQVKKEEKPVKEEEKSVETKEEPMEKKESKKSTE
KDVKKEKEEPAKEKETKKTNTFTWGSSSKKSDDKSSGTSYRPGSASYHPLESACWKKGES
VPYKALADTFSIIEDTSGRLKTIEILSDFLTSVMLLTPDDVKLCIYLCLNKLAPAYEGLE
LGIGETVLMKAIAQATGRSVDKLKVAAAEKGDLGLVAESSRSTQRTMFTPPRLTIKKVFS
KLKDIANLSGNSSMSKKVDLIKGLLVACKDCEARYLIRSLGGKLRIGLAEQSVLVALGHA
AVLAKPESDEMILKSKVNTSEKVKKAMEEAALLVKTAYCEMPTYDALIPVLMTHGVTELP
NHCRLTPSIPLKPMLAHPTKGVSEVLDRFQDTPFTCEYKYDGERAQIHLLESGKIHIYSR
NQEDNTTKYPDIIARLSAAVDEKVTSCILDSEAVAWDPEKKQILPFQVLSTRKRKDADAG
DIKVQVCVFAFDLLYLNGEPLVRKPLRERRSLLRDHFKEVEGEFIFAKSMISSDTDDIAE
FLEESVKGNCEGLMVKTLDKDATYEIARRSHNWLKLKKDYLDGVGDTLDVVVIGGFXGRG
KRVGCYGGFLLACYDEENEEFQSICKIGTGFKEEELEKHTKFFKDHVIDKPRPYYNYDSS
VAPDHWFDTVQVWEIKAADLSVSPVHKAAIGIVDPAKGISLRFPRFIRIRDDKKPEEATG
AAQVASMYNNQDQIKNQQANKSSKTEEDFY
NT seq 2433 nt   +upstreamnt  +downstreamnt
atgaggaagagagattcacctcctaaaccggtcaaagaagaatctaaagaccttgaagaa
gagaagatggaggaagaaaacattaagactgaagagaagactactttaaaggttaaagag
gagcctacatcaccaacagaaaagaaaaagaatgatgacaaatcaccttccaaaaaatcc
cccaaaccaagcaaagtaaaatcgctcagcagtgacaagaagtccaagaaatctaagact
gaatcagcaaagaaagaaaaacaagtaaagaaggaagaaaaacctgtaaaagaggaagaa
aaatcagtggagacgaaagaagaaccaatggagaagaaagaatctaagaaatccactgag
aaagatgttaaaaaagaaaaagaggaaccagcaaaggagaaagaaaccaaaaagacgaat
acattcacatggggcagcagcagtaaaaaatctgatgacaaaagctccggaactagttac
agacccggatctgcatcctatcatcctttggaaagtgcatgttggaaaaaaggagagagt
gttccatacaaggctctggctgacacattctcaatcattgaagacacaagtggaagatta
aagaccattgagatcttgtctgatttcttgacctctgtaatgctgctgacccccgatgat
gttaagctgtgtatctacctatgtcttaataagttagcacctgcttatgaaggtcttgag
cttggtatcggtgaaaccgtcctaatgaaggccattgcacaggccacagggcgatcagta
gacaagctgaaagttgctgctgcagaaaagggagatttaggactggtagcagagagcagt
agaagtacacaacgtaccatgttcacccctccaagactgaccatcaagaaagtcttctct
aaactcaaagatattgccaaccttagtgggaattcaagtatgtcaaagaaagttgatctg
attaaaggactgctagtggcctgtaaggattgtgaagctagatatctcatcagatcactg
ggagggaaattgaggattggtcttgcagagcagtctgttcttgtagccctaggtcatgct
gctgtcttagccaagccagagtcggatgagatgatcctaaagagcaaggtcaatacctca
gagaaggtcaagaaagcaatggaagaagcagcactcctcgtcaaaacagcctactgtgag
atgccaacgtacgatgccctgattccggtgttgatgacccacggagtgacagagcttccc
aatcactgtcgtctgactccatcgattcctctcaaacctatgttagctcatcccaccaaa
ggagtatcagaggtcctagatagattccaagatacgccatttacttgtgaatacaagtat
gatggtgaacgggctcagattcatctgcttgagtctggtaagattcacatatacagcagg
aaccaagaagacaacacaaccaaatatcctgatatcattgcaaggctctctgcagctgtt
gacgagaaggtaacatcgtgtatcctggattcggaggcggttgcttgggatccagagaag
aaacagatcttaccattccaggtcttgagtacgaggaaaaggaaggatgctgatgccgga
gatattaaggtccaagtctgcgtctttgcttttgatcttctttacctcaatggagagccc
ctggtgaggaaacctctcagagaacgtagaagtctattgagagatcacttcaaggaagta
gaaggagaatttatctttgccaagtccatgatctcctccgatactgatgacattgctgaa
ttcttagaggaatctgtcaaaggaaactgtgaaggtctaatggtgaaaacactggacaag
gatgcaacctatgagatagcaagacgatcacataattggctcaagctgaagaaagactac
ttggatggagttggagatactctggatgtggtcgtgattggtggtttcnaggggcgtggc
aaaagagttggttgctacggaggtttcctactcgcatgctacgatgaagagaatgaagag
tttcaatctatctgtaagattggaactggcttcaaggaagaagagttggagaagcacaca
aagttcttcaaggatcatgtgattgataagccacgcccatattataactacgacagcagt
gtagcccctgatcactggtttgatacggtacaagtatgggagatcaaagctgctgatctc
tcggtctcacccgtacacaaggcagctataggaatagttgatccagcgaagggtatttct
ctacgatttccaagatttatccgtatccgtgacgacaaaaagccagaggaggcaacaggg
gcagctcaggtggctagcatgtacaacaatcaggatcagatcaagaatcaacaagcaaat
aaatccagcaaaacagaggaagatttctattaa

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