Lytechinus pictus (painted urchin): 129272129
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Entry
129272129 CDS
T09066
Name
(RefSeq) general transcription factor IIF subunit 1-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129272129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpic03021
]
129272129
Transcription machinery [BR:
lpic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
129272129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
129272129
NCBI-ProteinID:
XP_054765336
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All DBs
Position
11:40786118..40799820
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AA seq
540 aa
AA seq
DB search
MYIFFFSYSQSTSSSSLSTPTRPNTGDVKEFNFRFPLNQRKKYSVMQFNRNDNVDLSKWK
QAKMERENNKIHYKTDLDDLPKFGAGSEFGRERKEEARQKKYGIIAQKYKEEDQPWILKQ
GAADGKTAKKYRGRKEGRINENSSYFILSQLADGTFEAYPVDSWYNFTAMQTYKTLNAEE
AEEEFGRRDKTMNYFSVMVQKKLRDSKEEEEMEEKSSKSKGSDLTLMEDDYFLSSGEENE
DSDDDGDGGGGKSKSKKKVKGKAKKTTKKRPKKKDVDSEAEEESDEGDFDGREFDYISEQ
SSDDDEMELAKTDIKGLDQELQQLEEEDDDEEESKEDNKETKEGDKLNDSKESKGKDSDE
SISDSSGSDSDIDEKNIQSAMLLQKKHGRRSNEKTPSKSGSGSHSRSQTPTVPDNSQTDT
TLSDAAMKLENKDVSSKKRLNPTESPATKRPRTESPVPGSSSSSNKTASGHVPLTEEEVK
RYLMKRPMTTKDLLVKLNPKRTGLPKEQIETKLAEILGKLAPEQRKKDKKIYWFIREHSK
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtatatatttttcttttcatattcacagagtacatcttcgtcatccttatcaacacct
actagaccaaatacaggagatgtgaaggaattcaatttcagattccctctgaatcagagg
aagaagtacagtgtgatgcaattcaatagaaatgacaatgttgatctctccaaatggaag
caggctaagatggaacgagagaacaacaaaatccactacaagacggacctcgatgacctg
ccaaagtttggggccgggagtgagtttggtcgggagaggaaagaggaagcaaggcagaag
aaatacggcatcatcgcacagaagtacaaggaggaggatcagccatggattctcaaacag
ggagcagctgatggaaaaacagctaaaaagtatcgtggaaggaaggagggaaggataaat
gagaactctagttacttcatcctctctcagctggctgatggaacgtttgaggcataccct
gttgactcctggtataacttcacagcgatgcagacgtataagacactaaatgcagaggaa
gcagaggaggagtttggcaggagagacaaaacgatgaattatttttcggtgatggtgcag
aaaaaactcagggactcaaaggaggaagaggagatggaggaaaagtcatctaaatcaaaa
ggctcagatcttaccctaatggaggatgattacttcttatcatcaggagaggagaatgag
gatagtgatgatgatggcgatggtggaggaggtaaatccaagtctaagaagaaggtgaaa
ggcaaagctaagaagacgaccaagaagagacctaagaagaaagatgtagacagcgaggct
gaggaggagagtgatgaaggtgactttgatggcagggagtttgattatatctcagaacaa
tcaagtgatgatgatgagatggaactagccaaaacagacatcaaaggtttagatcaagaa
ctccaacaattggaagaagaggacgatgatgaggaagaatcaaaagaagataacaaagaa
accaaagagggcgacaaacttaacgattcaaaagagagcaagggcaaagatagtgatgag
agtatttcggacagctcagggtcagacagcgacatcgatgagaagaatatacaatctgca
atgcttcttcagaagaagcatggtcgaagatcaaatgaaaagacgccctctaagtcaggt
agcggaagccacagtagatcacagacgcctacagtaccagacaattctcaaacagatact
acgttatcagatgcagctatgaaacttgaaaataaagatgtatcaagtaagaagagattg
aacccgacagaatcacctgctactaagagaccaaggacggagagtcctgttcctggatca
tcatcgtcatcaaacaagacagcatcaggtcatgtgcccttgacggaggaagaggtaaaa
cgatacctaatgaagagaccgatgaccaccaaagacctactggtcaagctgaatcccaag
aggactggacttcctaaagaacaaattgagaccaagctggctgagattttgggcaagctt
gcgccagagcagaggaaaaaggataaaaagatctactggtttatcagagaacactccaaa
tag
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integrated database retrieval system
