Lytechinus pictus (painted urchin): 129273440
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Entry
129273440 CDS
T09066
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lpic03041
]
129273440
Enzymes [BR:
lpic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129273440
Spliceosome [BR:
lpic03041
]
Complex C
Other components
Complex C specific factors
129273440
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
zf-CCHC
UTP25
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
129273440
NCBI-ProteinID:
XP_054766444
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All DBs
Position
12:complement(7726017..7766042)
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AA seq
630 aa
AA seq
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MIDSISYDQAMDGKRNSDSSSYSNHHLKRNLHDEKSHSDDDSYVPYVPLKERRKQKVVRI
QKLVTRRVVEPDDDGQHKYLEEEDLDTGPRANVSLLDQHSELKKKAESTKSTALDKQLEE
EQKILNNIQEQRALKTAAELAKGITYSDSLVTGWRPPRCITELGEARHERVRKKLHILVE
GYDIPPPIKHFKEMKFPKSIIYGLKKKGITRPTPIQIQGLPVILEGRDMIGIAFTGSGKT
LVFSLPIVMFSLEQEKRMPFIKNEGPYGLIICPSRELARQTHDGIMHFIKCLEADNQPSL
RSMLCIGGVSVKEQMDSVRKGVHIVVATPGRLIDMLNKKCFSLSVCRYLCLDEADRMIDL
GFEEDIRTILTYFKSQRQTLLFSATMPKKIQNFAKSALVRPVTVNVGRAGAASLDVIQEV
EYVKQEAKMVYLLECLQKAPPPVLIFAEKKADVDDIHEYLLLKGVEAVAIHGGKDQEERT
RSVEQFRAREKDVLVATDVASKGLDFPDIQHVINYDMPEDIENYVHRIGRTGRCGKTGIA
TTFINKACDESVLRDLKHLLIEAKQKLPPVLEAIEDENEEYINIGDERGCSYCGGLGHRI
TECPKLEAMQNKAASSIGRRDYLAHGAADW
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgattgatagcatatcttatgaccaagccatggatgggaaacggaattcagactcatct
tcatattctaatcatcacctgaaacgtaatcttcatgatgagaaaagtcactcggatgat
gacagctacgtcccatatgtgcctctaaaagaaagacggaaacagaaggttgtcaggatc
caaaagcttgtgactcgtagggtggttgagccggatgatgatggacagcacaaatattta
gaagaggaggatctggacactgggcctagagccaatgttagtcttcttgatcaacactct
gaactcaagaaaaaggcagagagtaccaaatcaacagcattggacaaacaactggaagaa
gaacagaagattctcaacaacatccaggaacaaagagctctgaaaactgcagcagaattg
gccaaaggcatcacatactcggattcacttgttacaggatggagaccaccaagatgcatc
acggagttgggcgaggccagacacgagagggtacgcaagaagcttcatatactggtagag
gggtacgacataccccctcctatcaagcatttcaaggagatgaagtttcccaagagcatc
atatatggactgaagaagaagggaatcactcggcctacaccgattcaaatacagggtcta
cctgtaatacttgaaggtcgtgacatgatcggtatagctttcaccggttcagggaagaca
cttgtcttctctctacctatcgtcatgttttctttggaacaggagaagagaatgccgttc
atcaaaaatgaaggtccttatggtcttatcatctgtccatctcgtgagttggcacgccag
acccatgatggtatcatgcacttcatcaagtgtttagaagcagacaatcaaccttccctg
aggagtatgttatgcatcggtggtgtgtctgtcaaagaacaaatggattcagtgagaaaa
ggtgttcacatagttgtagctacaccaggacggctgattgacatgctgaacaagaaatgc
ttctcattatctgtatgtcggtatctctgtctggatgaagctgacagaatgattgattta
ggattcgaagaagatatccgaacaattctcacatacttcaagagtcagagacagacactc
ctcttcagtgctaccatgcccaagaagatccagaactttgcaaagagtgccctcgtcagg
cccgtcactgtcaacgtgggtcgagctggagcagccagtcttgacgtcattcaggaagta
gagtatgtgaagcaagaagcaaagatggtttatctcttagagtgtcttcaaaaagcaccg
cccccggttcttatttttgctgagaagaaagcagatgtagatgacatccatgagtatctt
ctccttaaaggagttgaagcagtcgctatacatggaggaaaagatcaagaggaaagaacc
agatcagttgagcagttccgagcacgagagaaggatgtcttggttgctacagacgttgcc
tctaaaggtttggactttccagacattcaacacgttatcaactatgacatgccagaagat
attgaaaattatgttcacaggattggacgtactggccgatgtggaaagactggtatagct
acaacattcattaacaaagcttgtgatgagtctgtgctgcgtgatctgaagcatctgttg
attgaagccaagcagaaactccctccagtgctagaagctatcgaagatgagaatgaggaa
tatatcaatatcggagatgagcgtggttgttcatactgtggtggtcttggtcacaggatt
acagagtgtcccaagttggaagccatgcagaacaaggcagctagcagtatcggcaggaga
gactacctagctcatggagctgcagactggtga
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