Lytechinus pictus (painted urchin): 129279230
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Entry
129279230 CDS
T09066
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit DKC1-like
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
lpic
Lytechinus pictus (painted urchin)
Pathway
lpic03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129279230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpic03009
]
129279230
03032 DNA replication proteins [BR:
lpic03032
]
129279230
Ribosome biogenesis [BR:
lpic03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
129279230
Prokaryotic type
129279230
DNA replication proteins [BR:
lpic03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
129279230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
PUA
TruB_N
UPF0113
Motif
Other DBs
NCBI-GeneID:
129279230
NCBI-ProteinID:
XP_054771299
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Position
16:complement(19854535..19869486)
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AA seq
568 aa
AA seq
DB search
MDGSAGSSKKSKKSKESKSLGDIQHEADFLIKPESAVAKLETAHWPLLLKNYDKLNIRTG
HYTPLPNGCSPLKREIKDYVSSGFINLDKPANPSSHEVVSWIKKILRVEKTGHSGTLDPK
VTGCLIVCIERATRLVKSQQSAGKEYVCIVRLHEAIENQSKLAKAIETLTGALFQRPPLI
SAVKRQLRVRTIYESKLLEYDPQRHLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQMAELR
RVRSGIQSEKEGLVTMHDVMDAQWVHDNHKDEGYLRRVIKPMEALLTGHKRIVLKDSSVN
SVCYGAKVMLPGVLRFEDGIEINSEVVLMTTKGEAIALGIALMTTSTMATVDHGLVVKLK
RVIMERDVYPRKWGLGPKASMKKMMIKQGKLDKHGKANADTPKDWVKGYEDYSVKKETVE
KEKPVVETPVKKRRRESSTSSTEAPPVTPSGDASAVKEKKKKKKDKKVKEEVVEEEEEET
METSVAETPKSEKKKKKKKMKSEPEAEEEEEMVEETAAETPKSEKKKKKKIKLEQAEEEE
SQETVVETPSSEKKKKKKKKKEKAEDDS
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggatgggagtgcaggatcaagcaagaagagtaaaaagagcaaggagtccaaatcactt
ggggatattcagcatgaagcagattttctgatcaaaccggaatcggccgtagccaaactc
gagacggcccactggcccttgcttctaaagaactatgataaattaaacatcagaacgggg
cattatacaccattacccaatggttgctcacccctcaaacgggaaatcaaggattatgtc
tcgagtggttttatcaaccttgacaagcccgccaatccttcatctcatgaggtcgtgtcg
tggatcaagaagattctccgggtcgagaagacgggtcacagtgggacccttgaccccaag
gtcaccggttgcctcattgtctgtatagaacgagccacacgattggtcaaatcacagcag
agtgcaggcaaggaatatgtctgcattgtcaggttacatgaagctattgaaaaccagtca
aaactagccaaggctattgagacactgacaggagcactgttccagagaccgcctttaata
tcggccgtcaaacgtcaacttagagtgaggacgatatacgagagcaaactccttgaatac
gacccacaaagacacttaggtattttctgggtgagctgtgaagcaggaacttacatcagg
acactatgcgttcatcttggactcctgttgggggtcggaggtcaaatggcagaactcagg
agagtgcgatccggtattcagtcagaaaaagaagggttggtgacgatgcacgatgtcatg
gatgcccagtgggttcacgacaaccataaagatgaaggttacctcaggagagtcatcaag
ccgatggaagccttgcttacaggtcacaagagaatagtactcaaagacagctcagtgaat
tctgtctgctacggtgccaaggtcatgcttcccggcgtcctccgcttcgaggacggcatc
gagatcaactcggaggtggtgctgatgaccaccaagggagaggccatcgctcttggcatc
gcattgatgaccacatcgaccatggcaacggttgaccatggcctggtggtcaagctgaag
agggtcatcatggagagggacgtgtaccccagaaagtggggcctcgggccaaaggcgagc
atgaagaagatgatgatcaagcaagggaagttagacaagcatggcaaagctaatgcagac
acacccaaggattgggtcaaaggctatgaagactacagtgtgaagaaagagacagtggag
aaagagaagcctgttgtggagacgcctgtcaagaagcgcaggagagaatcgagtacctcg
agcaccgaggctcctccagtcacgcccagtggggatgcatccgctgtcaaggagaagaag
aagaaaaagaaggacaagaaagtgaaggaagaagtagtggaagaggaagaagaggagacg
atggaaacatcagtcgcagagacgcctaaatcagagaaaaagaagaagaaaaagaaaatg
aagtctgaaccagaggcagaggaggaagaggagatggtggaagaaacagcagctgagaca
ccaaaatcagagaagaagaaaaagaaaaagatcaaacttgaacaggcagaagaggaggaa
tcacaggaaacagtagttgagaccccatcatcggaaaagaagaagaaaaagaagaaaaag
aaggagaaggcggaagacgacagctga
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