Lytechinus pictus (painted urchin): 129283208
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Entry
129283208 CDS
T09066
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47-like
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
lpic
Lytechinus pictus (painted urchin)
Brite
KEGG Orthology (KO) [BR:
lpic00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lpic01002
]
129283208
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lpic04121
]
129283208
Enzymes [BR:
lpic01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129283208
Peptidases and inhibitors [BR:
lpic01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129283208
Ubiquitin system [BR:
lpic04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129283208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
129283208
NCBI-ProteinID:
XP_054775018
LinkDB
All DBs
Position
19:22973639..23014164
Genome browser
AA seq
1454 aa
AA seq
DB search
MVPIDSSQLVPLNDTCTADLPKILCIIYDITNPQWQTCKFTVTLPTSTTAAELCEEVARQ
ANYEPDTFELYWQRGGKDGNDDVLMSDKGQSSLGELGLPTTGRNLFNLQDKDGTQPVPIQ
AGASGTTTSPSDIDALNLATDDTSPIITATSDTSSLSSDYSSYVPYSSAVIGRSETGFVG
LVNQAMTCYLNSLMQTLYMTPEFRNAVYKWEYTDTQEERSKSIPYQLQRLFIQLQTSKKR
SIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEKKWKNTDQSDLINQLYQGQMKDYV
KCLKCGYESARSDAFLDIPLVIRPFGANKVYSSVDEALQAFVEPETLDESNQYFCEKCNM
KCDAHKGLKFQRFPYLLTLQLKRFDFDYSTMHRIKLNDKMTFPEILDLNAFVVNEADSQG
EPPTQTTVQAYVEGETQSDSGAENEDGSPSSQSQENSLEDALDEGIVMEQTSTAMTNHRN
EQERQTKGPFMYELFSIMVHSGTASGGHYYAYIKSFTDGQWYCFNDQHVTRITYDDIRKT
YGGEPTHYRGYYSSSYTSSTNAYMLMYRQIDPLRNASFLNADNFPSHISHLSTGLYQEEE
EEKRQREIERNTCKIKLFGVHPVTGKSIETRLEVHKDKTLTEATQSGHELLGYDGVIPVE
QCRMVKYDEFHESLERSYEGEEDTPMGQLLGGVKGSYMFDLLMETRTAEHQFQSYKPGGV
TIKLFVVDLRQDEIRNPITTRAYHQTTIADLKQQIEGLTGLSSSKMRLVLEKYYNELRLL
TVPSKNLKSEGFSKCNKVFVEASGLEDVDIEFPSSQLYTLLDRYANTIRLLVSLPPPLGE
EEDSSKDEVSETSSSIDSVAEKFSDLQVETGGLSPNKIPTPSPTGSSSTLSDDHPLEKNG
VNLVGSETDSGVVSLNEARLTDEQPGEDDNVLGDELRGEPDGGCDSLKEKQSIVDPLNAQ
ELTDALNAARPVASDLMPIHPPKDASHRDKGESAPRVPSLSSQRQIAKSHLTLPVASQSQ
AAASCTECGKLQVPDAGSLRPRAMSPLPGPLNPQIMDAIHRRRDAVDQSCDRGADGMEPG
FIGPSGPPLGYAEPPNVDSDQELSDAVRTQRKKKNWYFKPLELSDTEEGRVLVVNLDRRM
SLGFFKTCVETHVGTTALNFKVYRVYANNQEFESIRLNETLQSYSDDSRIVIKLGRALRK
GEYRVNIHQLQVNSNEPIRYLFDWVFAKGMTVLQSKKELLPELKKKCGIDVPLDRLRLRK
KSWKNPATIFLNDRIYEEDIPIFTNWEVFVELLDRPEQVQSSSQLALYVRRWRPSEMKLD
PFEEVILDDTNVTDLKAALADISGIPVESIEFAKGRGTFPCEISLLEMNTDLEWEPRVTA
LNTWPLYITDDGTVIYYRDNREELKELQEDEKREIQKKENARLSKTGQKVTYSPRKERAL
KIYTDSPPPYSAIN
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atggtaccgatagatagtagccagctggttccattaaacgatacttgtaccgctgatctt
cccaagatcctttgcatcatctatgacatcaccaacccgcaatggcagacgtgcaagttc
accgtcacgctgccgacgtcgacgaccgccgcggagctctgcgaggaggtggcccgtcag
gccaattacgaaccagacacgtttgagctgtactggcagagaggaggaaaagatggcaat
gatgatgttctcatgagcgacaagggtcaaagttcactgggcgagctcggcctgccgaca
acgggaaggaatctattcaacctgcaagacaaagatggcacccagccagtccctatacag
gctggggcaagcggaaccacgacatctcctagcgacatcgatgccttgaacctagcgaca
gatgatacaagtccgatcatcacagcgacttctgatacgagttcgctctcatcagattac
tcctcgtatgtcccttactcctctgcggtcattggacgatcggaaaccggttttgttggt
cttgtcaaccaggctatgacatgctatctcaacagtctgatgcagactctctacatgacc
ccggagttccggaacgccgtctacaaatgggagtacaccgacacacaagaggaacggtct
aagagcatcccgtatcagctccagcgcctcttcatccagcttcagacgagcaagaaaagg
tcgatagagacgacagacgtcacacgcagctttgggtgggacagcagtgaagcttggcag
cagcatgatgtgcaggagctgtgtagggtcatgtttgatgctctggaaaagaagtggaag
aacacggatcagagtgatctcataaaccagctataccagggtcagatgaaagactatgtc
aagtgtttaaagtgcgggtatgaaagtgcaagatccgatgcattcctggacatcccgctg
gtgatcagaccgtttggtgcaaacaaggtctacagcagtgttgacgaagcattgcaagcc
tttgtggaacctgagactttggacgagagtaaccagtatttctgcgaaaagtgcaacatg
aaatgcgacgctcacaagggactcaagtttcaacgctttccatacctccttactctacaa
ctcaaacgattcgactttgattatagtacaatgcatcgcatcaaactcaacgacaaaatg
acgtttcctgagatccttgacttgaatgcattcgtggtaaatgaggccgactcacaaggg
gaaccccctacacagacgacggttcaagcatacgtggaaggggagacacaatccgacagc
ggagcggagaacgaggacgggagcccaagcagtcagagccaagagaattccctagaggac
gccctcgacgaggggatcgtcatggaacagacgtcgactgcaatgaccaatcataggaat
gaacaagaaagacagacgaaggggcccttcatgtatgagctcttctccatcatggtgcat
tctgggacggcatcagggggacattattacgcctatatcaaatcctttactgatggtcag
tggtactgtttcaacgaccagcacgtaacccggatcacctacgacgatatccgcaagacc
tacggcggagagccgacgcactatcggggctactactctagttcttacaccagctcaacc
aacgcgtacatgttgatgtacagacaaatagacccacttcgcaatgctagtttcctgaat
gcggataacttcccgagtcacatatcacacctctccacgggactctaccaggaagaagaa
gaggagaagagacagagagagatagagagaaacacatgcaagatcaagctatttggagtt
catccagtgacaggaaaaagcattgagacgagactagaggtgcataaggataagacttta
acagaggctacacaaagtggccatgagttacttggatatgatggtgtgataccggttgag
cagtgccgtatggtcaagtatgacgagtttcacgagtcgctggagaggtcatacgagggg
gaagaggacacacccatgggtcaactcctcggaggggtcaaggggtcgtacatgtttgac
cttctgatggagacaaggacagcggagcaccaattccagagctataaaccaggaggtgtg
acaatcaaattatttgttgtcgacctgaggcaagatgaaatccgcaatcccatcacgacg
agagcgtaccatcaaacgacaatcgcagaccttaaacaacagattgaagggttaaccggt
ctatcatccagtaagatgcgcctggtattagagaaatactacaacgagcttcgtcttctc
accgtccctagcaagaatttgaaatcagagggattcagtaaatgcaataaggtgtttgtt
gaagcaagtggtctggaagatgtggatattgaatttccaagttcccagctctacacccta
ctcgatagatatgccaacacgatccgtcttcttgtatcactaccaccaccgctaggagaa
gaggaagacagttccaaagatgaagtgtcagagacgagttcatcaatagactcggtggcg
gagaaattctccgaccttcaagtagagactggaggcctctctcccaacaaaatcccaacg
ccgagcccaacaggaagttcctcaacgctgagcgacgatcacccgctggagaagaacggt
gtgaatttagtgggtagtgaaacggacagtggagttgtgtcactgaacgaagctcgtctt
acagatgaacaaccaggagaggatgataatgtattaggagatgaactccgtggggaaccc
gatggcgggtgtgatagtctaaaagagaagcaaagcattgtggaccctttgaatgctcaa
gaattaactgatgcgttaaatgcagcaaggccagttgcgagcgatttaatgcctatacat
ccgcccaaggatgcaagtcacagagacaaaggggaaagcgcccccagagtcccttcttta
tctagccagagacaaatcgccaagagccacttgacgttgccagtggcgtcgcaatcgcag
gctgcggcttcctgcacggaatgcgggaagctgcaggtgcccgacgcgggcagccttcgt
ccccgggccatgagcccgcttccgggacctctcaaccctcaaatcatggacgctattcat
aggcggagggacgcagtggatcagtcgtgtgataggggtgcagacgggatggagccgggc
tttattggtcctagcggaccccctctagggtatgctgaaccccctaacgtagactcagat
caggaactcagtgatgcggttagaacgcaaaggaagaagaagaattggtacttcaagcct
ttagaactctcagatacggaggaaggcagagtgttggtggtaaaccttgacaggcggatg
tcattaggattcttcaaaacgtgcgttgaaacacacgtaggaacaacagcactcaatttc
aaggtctacagagtgtatgccaacaatcaagagtttgagagtatccgattgaacgaaaca
ttgcaatcatacagtgacgatagtcggatagtcatcaaacttggcagagctctgcggaag
ggggagtatcgggtcaatattcatcaattacaagttaactcaaatgagccaatcaggtat
ctctttgattgggtgtttgccaaaggtatgactgtcttacagtcaaagaaagaactcctt
ccagaactcaagaagaaatgtggaatagacgtccctctagacaggttacgtttacggaag
aagtcatggaagaaccctgccaccatattcctcaacgaccgaatctacgaagaagatatc
ccaatcttcaccaactgggaggtctttgtggagctcctagatagaccggagcaagtgcag
tcgtcatcccaactggcattgtatgtcaggcgatggcgcccttcagagatgaagctagat
ccctttgaggaagtgattcttgacgataccaatgtcacggacctcaaggcagcgctcgca
gacattagtggaatccccgttgagagcatcgagtttgccaagggtcgggggacgttcccc
tgcgagatctccctcctagagatgaatacagacttggaatgggagcctagggtcactgca
cttaatacgtggcctctgtacatcacagatgatgggaccgtcatttactacagagacaat
cgggaggagctgaaagagctacaagaagatgagaagagagagatacagaagaaagaaaat
gcaaggttatccaagaccggtcagaaggtgacctattcgcctcggaaggagagagcgctg
aagatctacaccgatagccctcccccatacagtgcaatcaactaa
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integrated database retrieval system
