Limnochorda pilosa: LIP_0527
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Entry
LIP_0527 CDS
T04150
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
lpil
Limnochorda pilosa
Pathway
lpil02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lpil00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LIP_0527
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpil02000
]
LIP_0527
Transporters [BR:
lpil02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LIP_0527
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
BAS26384
UniProt:
A0A0K2SHR6
LinkDB
All DBs
Position
553062..554702
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AA seq
546 aa
AA seq
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MIVDGLCRRRAPVGVGLLVLALSVVLIGTAPALAQQRGGRMVVSYLSDVTTLDPAIGYDW
QNWSIIKSIFDGLMDYVPGTTNLRTHLAESYAISPDGLTYTFRLRPGVRFHNGRELVAAD
VKYSIERVLDPATQSPGQGFFTDIVGADERIAGQAGEVPGIRVIDDRTVEFVLKQPNAAF
LHILGLNFAHVVPREEVERYGADFGHNPVGTGAFKMREWVLGQRLVLQRNPDYFLPDRPF
LDELIFEVGIDPLVAYLRLQRGEVDVLGDGIPAARFVQVMNDANLRPLVAVGDQLHTGYV
AINTQVEPFDDVRVRRALNMAINKERIVQIINNRAEPANQPLPPLMPGYGSSYAGFSYDP
QAARALLAEAGYPNGFRTVLYANNTDPNPRIAQAIQQDLSTVGVQVELRVLAQGPVIEAA
GTPEAAPLVWSGGMAWIADYPDPGNFYWPILSCRSATPGGWNWAWYCNPELDRMAAEADA
ITAPERQDERIEIYRQVFTQIAEDGAWIPVFNERRFTMHSDRVGGDELLFVDPIHIPVNY
DEVYVR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
gtgatagtggacgggctctgcagacgacgggcgcccgtgggtgtgggcttgctggtgttg
gccctcagcgtggtcctgatcggcacggcgcccgcgctcgcgcaacagcggggcggacgc
atggtggtgagctacctgagcgacgtgaccacgctggatccggccatcggctacgattgg
caaaactggtccatcatcaagtccatcttcgacgggctcatggactacgtgcccgggacc
accaacttgaggactcacctggccgagtcgtacgcgatctcgccggacggtctcacgtac
actttccggctgaggccgggcgtccgcttccacaacggccgggagctggtcgccgccgac
gtcaagtactccatcgagcgcgtgctcgacccggcgacccagagcccgggccagggcttc
tttaccgacatcgtgggcgcggacgagcggatcgcaggccaggcgggcgaggtcccgggc
atccgggtgatcgacgaccggacggtcgagtttgtgttgaagcagcccaatgcggccttc
ctccacatcctgggcctcaacttcgcccacgtggtgcccagggaggaagtcgagcgctac
ggggccgacttcggccacaacccggtgggcactggggccttcaagatgagggagtgggtg
ctcggccagcggctggtcctgcagaggaaccctgactacttcttgccggatcgcccattc
ctggatgagctcatcttcgaggtggggatcgacccgctggtggcctatctgcgcctgcag
cggggcgaggtggacgtgctgggcgacgggatccccgcggcgcggttcgtccaggtaatg
aacgatgcgaacctgcggcccctggtggcggtgggggaccagctccacaccggatacgtg
gccatcaacacgcaggtggagcccttcgacgacgtccgggtccgccgtgcgctcaacatg
gcgatcaacaaggagcggatcgtccagatcatcaacaaccgggccgagcccgccaaccaa
ccgctcccgcccctgatgcccgggtacggttcgtcgtacgcaggcttctcctacgacccg
caggctgcccgggcgctgctcgccgaggccggttacccgaacggcttcaggaccgttctc
tacgccaacaacacggaccccaacccccgcatcgcccaagcgatccagcaggacctgtcc
accgtgggggtgcaggtagagctgcgggtcctggcccagggcccagtgatcgaagctgcc
ggcacccccgaggccgccccgctggtctggtcgggcgggatggcctggatcgccgactat
cccgacccgggcaacttctactggcccatcctctcgtgccggagcgccaccccgggcggg
tggaactgggcgtggtactgcaacccggagcttgatcgcatggccgctgaggcggacgcc
atcacggcgcctgagcggcaggacgaacggatcgagatctaccggcaggtcttcacccag
atcgcggaggacggggcgtggatcccggtcttcaacgagcgccggttcaccatgcactcc
gaccgggtgggcggggacgagctgctctttgtggaccccatccacatcccggtcaactac
gacgaggtgtacgtccgatga
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