Limnochorda pilosa: LIP_0829
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Entry
LIP_0829 CDS
T04150
Name
(GenBank) hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lpil
Limnochorda pilosa
Brite
KEGG Orthology (KO) [BR:
lpil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpil03400
]
LIP_0829
Enzymes [BR:
lpil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LIP_0829
DNA repair and recombination proteins [BR:
lpil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LIP_0829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
BAS26686
UniProt:
A0A0K2SHU7
LinkDB
All DBs
Position
871860..875000
Genome browser
AA seq
1046 aa
AA seq
DB search
MELTPRSWPHLEEILRQEPGRRYVLLVRSRPAGDQMLERLARQGVSWANVRVRTPGDLAL
ELAAPELARRGLERATRGQSLYLVDELVRSGCGGGWFLRRAGQPPNLAPEAPASPTDGLV
RAVHRSLMELRLHGLSAASLDPSAFSPPAKGEALARLLAAYEDRLAQLSLVDEPGVLRLA
VDQAPSDAGEGAHGEDGPLCLVPAGLELLGLERELVRRAGRGRVARFAPGRGGPRTIGFF
HATGPEAELRSVLRRVLAGGVPLDQVEVVATDGAAYAEVLHALAVPMGIPVTFAGGLGIE
HTSPGRGALAYLDWIIGGYPAGVLARALASGDLAPGPAATGFTQPSGTASAGRRAGDRAR
SLADRLLESPIGWGRERYRAWVDGHRLRRPARGGHGASGASGEPDRDLAAFLEELLALTP
DAAPGRGVGMGGVARALHRVVTRFTVERSPLDRGGRAALLQALEGLERIAARAAGVGPAG
GVSEAEAAVAGEDTAGAELGTETLERVAGRLRAWIAALRVGQGEPRPGTLHLAGLEQGGY
SGRPHVFLVGLDEGRFPGRGGQDPLLLEGDRSRLPGGLPLAGERMSAHRKSLQDLLDRLE
GSLTCSYSSWDPLNAQEVAPSAALLELFRRSSGRADADYSALREALGPPDGVVPAGAPPA
LDRSEAWLAAIAVGPPESRRLAHPGEGLARAFPLLAAGQEAAAARASDRLTPHDGQIEPE
ADLDPRRTGQPVSAGRLETLAGCPLRYFFRYVLEVAPPERPQLDPDRWLDPLSRGGLLHQ
IYRAFLEERIGSGRAGAPIDAADRARMGELARDAAGEMRLRVPPPSEGVFERERRELVDE
ALFFVSLEAGREDGGVPVLLERAFGMEGEPPVELDLAGDPARPEVLRLLGRIDRIDRLPD
GYAVWDYKTGAATRYESERTHLDGGRQLQPVLYAWAAEAILRRAGIDPDPQVRRSGYLMT
SRRGRGQRLDRPQDPARREAARALLRRLLDVAAAGTFAPAPDADRQCPFCDYRSACDGPE
AVRRVRAKAEAGEARLALWEEVRRYE
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
gtggagttgacgccccgctcgtggccccatctggaggagatcctgcgccaggagccgggc
aggcggtacgtgctcctggtccggagccgccctgcaggcgatcagatgctcgaacgtctg
gcgcggcagggggtctcctgggccaacgtgcgggtgcgcacgccgggggatctggccctg
gagctggccgcgccggagctggcccgccgggggctcgagcgggcgacccggggccagagc
ctctacctggtggacgagctggtccgctcggggtgcgggggcggctggttcctccgccgc
gcgggtcaacccccgaacctggccccggaggcgcctgcctcgcccaccgacggtctggtg
cgggccgtgcaccggagcctgatggagcttcgcctccacggcctttcggccgcctccctg
gacccgtccgccttctcgccgccggccaagggcgaggccctggcccgactcctggccgcc
tacgaggaccgcctggcccagctctccctggtggacgagccgggcgtcctgcgcctggcc
gtcgaccaggctccgagcgacgccggcgagggcgcccacggggaagacggccctctctgc
ctggtcccggcaggcctggagctcctgggcctggagcgcgagctcgtccgccgggccggc
cgcgggcgggtggcccgcttcgctccgggtcggggaggcccgcgcaccatcggcttcttc
catgcgaccggacccgaggcggagcttcgctcggtgctccggcgggtgctggccgggggc
gtgcccctggaccaggtggaggtggtggccaccgacggcgccgcctacgccgaggtcctg
cacgccctggccgtacccatggggatccccgtcaccttcgccggcgggctcggcatcgag
cacacgtcccccggccggggagccctggcctacctggactggatcattggcgggtatccg
gcaggcgtgctggcccgggcgctggcctcgggcgacctggcgccggggcccgcagcgacc
ggcttcacccagccctcgggtactgcctccgccgggcgtcgtgcgggcgaccgggcgcgc
tccctggccgaccggctcctggaaagccccatcggctggggacgagagcgctatcgggcc
tgggtggacgggcaccgcttgcggagaccggcccggggcgggcacggggcctccggggca
tccggtgagccggatcgggacctggccgccttcctggaggagctcctggccctcaccccc
gacgcggcccccgggcggggcgtggggatgggcggcgtggcccgcgccctccaccgggtg
gtgacccggttcacggtggagcgctccccgctggaccggggaggacgggccgcgctcctg
caggctctggaggggctggagcggatcgcagcccgggcggcgggagtggggcccgccggt
ggcgtgagcgaggcggaggcggccgtggccggcgaggatacagccggggcagagctcggt
accgagaccttggaacgggtggccggccggctgcgtgcctggatcgcagccctgagggtg
gggcagggggagccgaggcccgggacgctccacctggccggcctggagcagggcggctac
tcgggccgcccccacgtcttcctggtggggctcgacgaggggcgcttccccggcaggggc
gggcaggacccgctgctcctggagggcgaccgctcgcgcctgccgggcggcctgcccctc
gccggcgagcggatgagcgcgcaccggaagagcctgcaggacttgctggaccgcctggaa
ggctcgctcacgtgcagctacagctcgtgggacccgctcaacgcccaggaggtggcccct
tccgcggcgctgctcgagctcttccgccgctccagcggacgggccgatgcggactactcg
gccctgcgggaggcgctgggccctccggatggggtggttcccgcgggcgcgccgccggcg
ctggaccgctccgaggcgtggctcgcggccatagcggtagggcctccggagagccgccgt
ctggcccatccgggggagggtctcgcccgggccttcccgctgctggccgccggccaggag
gcggctgcggcgcgggcatcggaccggctcaccccccatgacggccagatcgagccggaa
gccgacctggacccgcggcgaacggggcagccggtctcggcaggccggctcgagaccctg
gccgggtgccccctcaggtacttcttccgctatgtgctggaggtcgcaccgccggagcga
ccccagctcgatccggaccgctggctcgaccccctgagccgggggggcctcctccatcag
atctaccgggccttcctggaggagcggatcggctcgggccgggccggggcccccatcgac
gccgctgaccgggcccgcatgggggagctagcccgggatgcggccggcgagatgcgcctg
cgggtgccgccgccgagcgagggcgtcttcgagcgggagcggcgcgagctcgtggacgag
gccctcttcttcgtgagcctcgaggcggggcgggaggacgggggcgtgcccgtgctgctc
gagcgggccttcggcatggagggcgagcccccggtggagctcgacctggccggcgacccc
gcccggcccgaggtgctccgcctgctgggccgcatcgaccgcatcgaccggcttccggac
ggctacgcggtgtgggactacaagacgggcgcggccacccgctacgagagcgagcgcacc
cacctggacgggggccgccagctccagcccgtgctctacgcctgggcggccgaggcgatt
ctccgccgtgccggcatcgacccggacccccaggtgcgccgctcgggctacctcatgacc
tcccgccgcgggcgcggccagcggttggacaggccccaggacccggcgcgccgggaagcg
gcacgggcgctgctccggcggctgctggacgtggccgcggcgggcaccttcgcccccgcg
cccgacgcggaccggcagtgccctttctgcgactaccggtccgcgtgcgacgggcccgag
gcggtgcggcgcgtccgcgccaaggccgaggcgggcgaggcgcgcctggccctctgggag
gaggtgcggcggtatgagtga
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