Limnochorda pilosa: LIP_3528
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Entry
LIP_3528 CDS
T04150
Name
(GenBank) selenocysteine synthase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
lpil
Limnochorda pilosa
Pathway
lpil00450
Selenocompound metabolism
lpil00970
Aminoacyl-tRNA biosynthesis
lpil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lpil00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LIP_3528
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LIP_3528
Enzymes [BR:
lpil01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
LIP_3528
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GFIT
Motif
Pfam:
SelA
Se-cys_synth_N
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
BAS29340
UniProt:
A0A0K2SQD7
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All DBs
Position
complement(3692018..3693427)
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AA seq
469 aa
AA seq
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MERVGRRGLPAVDRLLRSEAGREAEARFGHAVARRLCREVIETHRQAVGAGEGIPSVAEL
EREVREATDRTGRSLFRSVLNATGVVLHTNLGRAPLSDEAAAAATRAATGYSNLEFDLET
GRRGSRHRHGELLLQELTGAEAAMVVNNNAAAVLLVLSAVASGREVLLSRGEMVEIGGSF
RIPDVMEQSGCRLREVGTTNRTRLADYERAIGLDTGAVLKVHQSNFRQIGFTESVESGRL
AELAHGHGLPFIEDLGSGVLVETRELGLEHEPMIQEVLRAGADLVTASGDKLLGGPQAGL
ILGRRRWVDACRRHPLARAVRVDKMTLAALQATLLHYLRGEGDAVPIWRMLRQPLSDLRA
RAERLAARVAGALPPSASARAAEGRSPVGGGSLPGQELATAGLELRVPGELEDLARRLRW
GEPSVVGRVEGDRLFLDLRTVRPEEDDLLLGALFRALDAGPGRHGEGQA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggagagggtggggcggcggggtctgcctgcggtggaccgcctgcttcgatccgaagcc
ggccgggaggcggaggcacgcttcggccacgccgtggcccggaggctctgccgtgaggtg
atcgagactcaccggcaggcggtgggcgcgggcgaagggataccctcggtggccgaactc
gagcgtgaggtgcgggaagcaacggatcgaaccgggcggtcccttttccggtcagtcctc
aacgccacgggtgtggtgcttcacaccaacctgggtcgggcgccgctttcggacgaggcc
gccgcagccgcgacccgagcggccaccggctacagtaacctggagttcgatctggagacg
ggacgccgcggttcccgccaccgccatggagagctcctgcttcaggagctgaccggagcc
gaggcggccatggtggtgaacaacaacgccgcggccgtgctcctggtgctgagcgcggtg
gcctccgggagggaggtgctgctctcccggggcgagatggtggagatcgggggctccttc
cgcataccggacgtgatggagcagagcgggtgccggctgagggaggtcggcaccaccaac
cggacccgactcgccgactacgagcgggcgatcggcctggacacgggcgccgtgctgaag
gttcaccagagcaacttccgccagataggtttcaccgagagcgtcgaaagcggccgcctg
gccgagctcgcacacgggcacgggctgccgttcatcgaagatctgggctccggcgtgctg
gtggagacccgcgagctgggcctggagcacgagcccatgatccaggaggtgctgcgggcg
ggcgcggacctggtgacggccagcggcgacaagctcctgggggggccccaggccggtctc
atcctgggtcggcgcaggtgggtcgacgcctgccggcggcacccgctggcccgggcggta
cgggtcgacaagatgacgctggcggcgcttcaggccacccttctgcactacctgcggggc
gagggggacgcggtccctatctggcgcatgcttcgccagccgctttcggacctgcgggcc
agggcggaaaggcttgcggcccgggtcgccggcgcccttccgcccagcgcctcagcgcgg
gcggccgaagggcgcagcccggtggggggcggttcgcttcccgggcaggagctggccacc
gcgggcctggaactgcgcgttccgggggagctcgaggatctggcacggcggctgaggtgg
ggcgagcccagcgtggtgggccgcgtcgagggcgaccgcctcttcctcgacctgcggacg
gtccgtcccgaagaggacgacctgctgctgggcgcgctcttccgggcgcttgacgccggc
cccgggcgccacggagaggggcaggcctga
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