Lactiplantibacillus plantarum JDM1: JDM1_1033
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Entry
JDM1_1033 CDS
T00946
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lpj
Lactiplantibacillus plantarum JDM1
Pathway
lpj00521
Streptomycin biosynthesis
lpj00523
Polyketide sugar unit biosynthesis
lpj00541
O-Antigen nucleotide sugar biosynthesis
lpj01100
Metabolic pathways
lpj01110
Biosynthesis of secondary metabolites
lpj01250
Biosynthesis of nucleotide sugars
Module
lpj_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
lpj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
JDM1_1033 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JDM1_1033 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JDM1_1033 (rfbC)
Enzymes [BR:
lpj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JDM1_1033 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ACT61920
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All DBs
Position
1095138..1095719
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AA seq
193 aa
AA seq
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MGKLKVTTTKLQDVKIIEPAVFGDKRGFFTETYSDRDFKEAGIDFDFIQDNQSLSAEAGV
LRGLHFQRGKAAQTKLIRVVTGAVLDVIVDVRAGSPTYGEWEGYIISESNHRQLLVPRGF
AHGFVTLTDNVNFLYKCDNYYNAEADGGITFMDKDLNINWPIDYDQAITSEKDAKQQTFK
EFEQNNPFVYGEI
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
ttgggcaaattaaaggtaacaacgactaagttacaagatgttaagattattgaaccagca
gtttttggtgacaaacgcgggttctttacggaaacctactcggatcgcgacttcaaagaa
gctggcattgattttgacttcattcaggataatcaatcattgtcagcggaagcgggtgtt
ttgcggggactgcattttcaacgtggcaaggcagcgcaaactaaattaattcgcgtggtg
actggtgccgtgcttgatgttattgtggacgttcgtgctggctcacctacgtacggtgaa
tgggaaggctacattatctctgaaagtaaccaccgtcaattgttagtcccccgtggcttt
gcccatggctttgtgacattgactgataatgttaatttcttatacaagtgtgataactac
tacaacgctgaagctgatggtggaatcacctttatggataaagatttaaacattaactgg
cctattgactacgatcaagctattacttctgaaaaggatgctaaacaacagactttcaaa
gaatttgaacagaataatccgtttgtttacggtgaaatttaa
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