Lactiplantibacillus plantarum WCFS1: lp_1188
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Entry
lp_1188 CDS
T00115
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lpl
Lactiplantibacillus plantarum WCFS1
Pathway
lpl00521
Streptomycin biosynthesis
lpl00523
Polyketide sugar unit biosynthesis
lpl00541
O-Antigen nucleotide sugar biosynthesis
lpl01100
Metabolic pathways
lpl01110
Biosynthesis of secondary metabolites
lpl01250
Biosynthesis of nucleotide sugars
Module
lpl_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
lpl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
lp_1188 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
lp_1188 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
lp_1188 (rfbC)
Enzymes [BR:
lpl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
lp_1188 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CCC78575
UniProt:
F9UMY6
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Position
1085724..1086305
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AA seq
193 aa
AA seq
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MGKLKVTTTKLQDVKIIEPAVFGDKRGFFTETYSDRDFKEAGIDFDFIQDNQSLSAEAGV
LRGLHFQRGKAAQTKLIRVVTGAVLDVIVDVRAGSPTYGEWEGYIISESNHRQLLVPRGF
AHGFVTLTDNVNFLYKCDNYYNAEADGGITFMDKDLNINWPIDYDQAITSDKDAKQQTFK
EFEQNNPFVYGEI
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaattaaaggtaacaacgactaagttacaagatgttaagattattgaaccagca
gtttttggtgacaagcgggggttctttacggaaacctactctgaccgtgatttcaaagaa
gccggcattgattttgacttcattcaggataatcaatcattgtcagcggaagcgggtgtt
ttgcggggactgcattttcaacgtggcaaggcagcgcaaactaaattgattcgcgtagtg
actggcgccgtgcttgatgttattgtggacgttcgtgctggctcacctacgtacggggaa
tgggaaggctatattatctctgaaagtaaccaccgtcaattgttagtcccccgtggcttt
gcccatggctttgtgacattgactgataatgttaatttcttatacaagtgtgataactac
tacaatgctgaagctgatggtggaatcacctttatggataaagatttaaacattaactgg
cctattgactacgatcaagctattacttctgataaggatgctaaacaacagaccttcaaa
gaatttgaacagaataatccgtttgtttacggcgaaatttaa
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