Lonsdalea populi: I6N93_05970
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Entry
I6N93_05970 CDS
T06954
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
lpop
Lonsdalea populi
Pathway
lpop01501
beta-Lactam resistance
lpop01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lpop00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I6N93_05970
01503 Cationic antimicrobial peptide (CAMP) resistance
I6N93_05970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpop02000
]
I6N93_05970
01504 Antimicrobial resistance genes [BR:
lpop01504
]
I6N93_05970
Transporters [BR:
lpop02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
I6N93_05970
Antimicrobial resistance genes [BR:
lpop01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
I6N93_05970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
2-Hacid_dh
DUF6877
Motif
Other DBs
NCBI-ProteinID:
QPQ25323
LinkDB
All DBs
Position
complement(1341061..1344168)
Genome browser
AA seq
1035 aa
AA seq
DB search
MFSRFFVRRPVFAWVIAILIMMAGLMSIRTLPVAQYPDVAPPSVRINATYTGASAETLEN
SVTQIIEQQLTGLDNLLYFTSTSSSDGEVDIEVTFAQGTNADTAQVQVQNKVQQAESRLP
SEVQSAGITITKSQSNFLLIMALYDKTDQATSSDIADWLVSNMQDPLARVNGVGSLRVFG
SEYAIRIWMDPNKLASYNLMPSDIESAIEAQNIQLSAGKIGAQPALADQQLTATVRAQSR
LQTPEQFRNIIVKSESNGAVVRISDVARVEIGSEDYTSSSRLNGHPSAGIAVMLAPGANA
LDTAELVKAKINEYSHSMPEGYEIAYPKDSTDFIKISVEDVVKTLIEAIVLVIIVMYLFL
QNLRATLIPALAVPVVLLGTFGVLALFGYSINTLTLFAMVLAIGLLVDDAIVVVENVERI
MRDEGLPARAATEKSMGEISGALVAIALVLSAVFLPMSFFGGSTGVIYRQFSITIISAMA
LSVVVALTLTPALCGLLLKHNTPHTKGFFGGFNRFYARTQKGYSHRVVSVLRRPLVMLIA
FAAIVALMILFLWRLPTSFLPNEDQGEIMVQYTLPAGATVNRTNDVNKRIADWFLKEEKD
NVSVVYTITGFNFSGSGQNAGMAFVALKNWDERPGSENTAQAVANRAMRALSTERDARIF
ATTPPSVQGMGQTNGFTFELLADGSTERAKLMELRSQLLKQAGASSELQSVRANDLPQMP
QLQVDIDNSKAVALGLTLSDVTDTLSSAWGGTYVNDFIDRGRVKKVYIQADSSFRSKPSD
LDKWHVRGSDDSMAPFSAFASTSWTYGPETLTRYNGSASFEITGENADGVSSGDAMNKIE
AIASQLPSGSTWAWSGLSLQEKLASGQALGLYAISIMVVFLCLAALYESWAVPFSVIMII
PLGICGAALAALLRGLSNDVYFQVALLTTIGLSSKNAILIVEFAELAVRQGSSLSAAVLS
AAKTRLRPIIMTSMAFIAGVIPLAIATGAGANSRIAIGTGIIGGTLMATLLAIFFVPLFF
VLVKHYFTRRHDVQE
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgttctcccgcttctttgtgcgacgcccggttttcgcctgggtgatcgcgatactcatc
atgatggcggggctgatgtcgatccggacgttaccggtcgcgcaatatcccgacgtcgct
cctccttccgtgcgcatcaatgcgacctacaccggggcctctgctgagacgctggaaaac
agcgtcacccagatcatcgaacaacagctgaccgggctggataacctgctctacttcacg
tccaccagcagttcggacggcgaagtcgacattgaggtgacctttgctcagggcaccaac
gccgataccgcgcaggtgcaggtacagaataaggtgcagcaggcggagtctcggctaccg
tctgaggtgcagtccgccgggatcaccatcaccaagtcccagtccaacttcctgctgatc
atggcgctgtatgataagaccgaccaagccaccagttcggatatcgccgactggctggtc
agtaacatgcaagatccgctggcgcgcgttaacggcgtcggcagcctgcgggtgttcggt
tccgaatacgccattcgcatctggatggatcctaataaactggcgtcctataacctgatg
ccgtcggacatcgaatcagcgatcgaagcgcagaatatccagctgtccgccgggaaaatc
ggtgcgcaacccgccttagccgaccagcagttgacagcgacggtacgcgcgcagtcgcgc
ctgcaaacgccggagcaatttcgcaatatcatcgtaaaaagcgagtctaacggcgccgtc
gtgcgtatcagcgacgtcgcccgcgtcgaaataggcagcgaagactacacgtcgtcctcc
cggctcaacggccatccctccgccggtatcgcggtcatgctggcaccgggcgccaacgcg
ctggatacggcggagttagtgaaggccaagatcaacgaatatagccacagcatgccggaa
ggctacgagatcgcgtatccgaaagacagtaccgacttcatcaagatttccgtcgaggat
gtcgtcaagacgctgattgaagctatcgtgctggtcatcatcgttatgtacctgttcctg
cagaacctgcgggctacgctgatcccggcactggcggtgccggtggtgctgctggggacg
tttggcgttctggcgctgttcggctactcgatcaataccctaacgttattcgccatggtg
ctggccatcgggctattggtggatgacgccatcgtcgtggtggaaaacgtcgagcgcatc
atgcgcgatgagggactccccgcccgcgcggccaccgaaaaatcgatgggcgagatatcc
ggcgcgctggtggccatcgcgctcgtgctctccgccgtgttcctgccgatgtccttcttc
ggcggctcgaccggcgttatctaccgccagttctccatcaccatcatctccgccatggcg
ctgtccgtcgtcgtcgcattgacgctgacgcccgccctgtgcggcttgctgctgaaacac
aacaccccccatacaaaaggcttcttcggcggctttaaccggttctatgcccgcacgcaa
aaaggttacagccatcgcgtggtctccgtgcttcgccgtccgctggtcatgttgatcgca
ttcgccgccatcgtcgcgctgatgatcctgttcctctggcgcttgcccaccagcttccta
cccaacgaagatcaaggcgagatcatggtgcagtacaccctgccggcaggcgcgacggtt
aaccggaccaacgacgttaacaaacgcatcgcggactggttcctcaaagaggaaaaagac
aacgtgagcgttgtctataccatcaccggctttaacttcagcggtagcggtcagaacgcc
ggaatggccttcgtcgcgctgaaaaactgggatgaacgccccggttcggaaaataccgcg
caggcggtcgccaaccgggcgatgagagcgctgtccaccgagcgcgacgcccgcatcttc
gccactacgccgccgtcggtgcaggggatggggcagaccaacggctttacttttgaactg
ttggccgacggcagcaccgaacgcgcaaaactgatggagctacgcagccaactgctgaag
caggcgggcgccagttccgaactacagtcggtccgcgccaatgacctgccgcagatgcct
cagttgcaggttgatatcgacaatagcaaggccgtcgcgctggggctcacgctgagcgac
gtcaccgatacgctgagcagcgcctggggcgggacttacgtcaacgactttatcgaccgc
ggtcgcgtcaaaaaagtctacatccaggcagacagctcgttccgctccaaaccgtcggat
ttagataagtggcatgtccgcggcagcgacgacagcatggcgccgttctccgcttttgcc
tcgacgagttggacctatggcccggaaaccctaacgcgttataacggttccgcctctttc
gaaatcaccggggagaacgcggacggcgtcagttccggcgatgcaatgaacaagatcgaa
gccattgcctcacagctaccgtcggggtcgacctgggcctggagcggactctctctgcaa
gagaaactggcgagcggtcaggcgctgggtctatacgccatttccatcatggtggtcttc
ctgtgtctggcagcgctgtatgaaagctgggcggtgccgttttccgtcattatgatcatt
ccgctcgggatctgcggcgccgcgctggccgccctgctgcgcggcttgagcaacgacgtt
tacttccaggtagcgctgttgaccaccatcgggctgtcgtcgaagaacgccatcttgatt
gtggagtttgcggagctggcggtgcggcaaggcagttccctgagcgccgcagtactgtcg
gcggctaaaacgcgtctgcggccgatcatcatgacttcaatggcattcatcgccggggtc
attccgctggcgatagccaccggagccggggccaacagccgtatcgccatcggtaccggg
attattggcgggacgctgatggccacgctgctggcgattttcttcgtgccgttgttcttc
gtgctggtgaaacattatttcacccgtcgccatgacgttcaggagtga
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