Lactiplantibacillus plantarum ST-III: LPST_C0405
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Entry
LPST_C0405 CDS
T01324
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lps
Lactiplantibacillus plantarum ST-III
Pathway
lps03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lps00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LPST_C0405 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lps03021
]
LPST_C0405 (rpoE)
03400 DNA repair and recombination proteins [BR:
lps03400
]
LPST_C0405 (rpoE)
Transcription machinery [BR:
lps03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LPST_C0405 (rpoE)
DNA repair and recombination proteins [BR:
lps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LPST_C0405 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Patatin
Motif
Other DBs
NCBI-ProteinID:
ADN97628
LinkDB
All DBs
Position
422356..422964
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AA seq
202 aa
AA seq
DB search
MELKQFDGQKKSELSLIEVAHAILSQHGDVMAFADLTNAVQSYLGKSDEEIRERLSQFYT
DLNIDGSFISLGDNMWGLRAWYPFESIDEAVIHTDDDEDEDRPKRKKRKKVNAFLADAGD
DDDVIDYDDDDPEDDDNYDDDDDQDDDTDDSASSKYDELAGVDDTDDDVADETLPDGIEG
QLSELNDDDDDDDYDDEDDESK
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
ttggaactaaaacaatttgatggacaaaaaaagtccgaattatctttaatcgaggttgct
cacgcgatcttatcacaacatggtgatgtgatggcttttgccgacttgaccaacgctgtg
caatcatatttaggtaaaagcgacgaagaaattcgggagcgtttatcacaattttatacc
gatcttaatatcgatggtagtttcatttcgctcggtgacaatatgtggggcctgcgtgca
tggtacccatttgaatccattgacgaagccgttattcatacggacgatgacgaagatgag
gatcggccaaagcgcaagaagcgtaagaaggttaacgccttcttggccgatgccggggat
gatgacgacgtgatcgattacgatgacgatgatcccgaagatgacgataactacgatgac
gatgatgatcaggacgacgatactgatgattcagcaagcagcaagtacgatgaacttgcg
ggtgttgatgacacagacgacgatgttgctgatgaaacgttgccagacggtatcgagggt
caattatcagagttaaatgatgacgatgatgatgacgactacgatgacgaagacgacgaa
tcgaaataa
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