Limnobaculum parvum: HYN51_04195
Help
Entry
HYN51_04195 CDS
T05491
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
lpv
Limnobaculum parvum
Pathway
lpv01501
beta-Lactam resistance
lpv01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
lpv00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HYN51_04195
01503 Cationic antimicrobial peptide (CAMP) resistance
HYN51_04195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpv02000
]
HYN51_04195
01504 Antimicrobial resistance genes [BR:
lpv01504
]
HYN51_04195
Transporters [BR:
lpv02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HYN51_04195
Antimicrobial resistance genes [BR:
lpv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HYN51_04195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
MMPL
Motif
Other DBs
NCBI-ProteinID:
AWH87830
UniProt:
A0A2Y9TWB5
LinkDB
All DBs
Position
2403462..2406611
Genome browser
AA seq
1049 aa
AA seq
DB search
MAKFFIDRPIFAWVIAIIIMLAGALAIIQLPISQYPTIAPPAISVSASYPGADAQTVQDS
VTQIIEQNMNGIDKLMYMSSTSDSAGNATVTLTFDSKADPDIAQVQVQNKLQLAMPLLPQ
EVQQMGISVEKASSSFLMVAGFISDDGSLSQEDIADYVGSNIKDPISRTSGVGDVQLFGS
QYAMRIWLDPNKLNNFSLTPIDVNNAIKVQNNQIAAGQLGGTPPVKGQQLNSSIIVQTRL
KTPEEFGQILLKINSDGSQVRLKDVATIALGGESYNIIAHYNGKPASGLGIKLATGANAL
DTSAAVKSELAALEKFSPPSLKIVYPYDTTPFIKISIKEVLKTLVEAILLVFIVMYLFLQ
NLRATLIPTMAVPVVLLGTFAVLSAFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERIM
VEEGLPPKEATKKSMVQIQGALVGIALVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMVL
SVLVAMILTPALCATLLKPVAKGSHGATKGFFGWFNNLFERNTHHYTNSVANILGSTGRY
ILIYLVLVAGMILLFIRLPSSFLPEEDQGVFLSAVQLPQGATQERTLNVLSEVTDYFLTK
ENHNVASVFTVSGFGFSGQGQNTGLAFVSLKDWSERSGRENKVPAIVGRATQSFSKIKDG
MVFAFNLPAIVELGTASGFDFQLIDQAGLGHEKLTEARNQLFGLVAKHPDMLVRVRPNGL
EDTPQFKLAIDQEKAQALGVSISDINQTLSTALGGSYVNDFIDRGRVKKVYVQADAPFRM
IPKDIDNWFIRGANGQMVPLSAFSSAHWQFGSPRLERYNGLPSMEILGEAAPGKSSGDAM
KLMEDLASQLPVGIGYDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSV
MLVVPLGVIGALLATTVRGMENDVYFIVGLLTTVGLSAKNAILIVEFAKDLMDKEGKGLI
EATLDSVRMRLRPILMTSLAFMLGVLPLALSTGAGSGSQNAVGTGVLGGMISATILAIFF
VPVFFVVVRRRFSKRGEDIEHTHAIEHKS
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggctaaattttttattgatcgcccgatatttgcttgggtaatcgccataattattatg
ttggcgggtgctctggcgataatccaattaccgatatcgcaatacccgaccattgctcct
ccggcaatatctgtttctgcgtcttatccgggtgcagatgcacaaacagtacaagactct
gtcacacagattatcgaacagaatatgaacggtatcgataaactgatgtacatgtcatcc
accagtgattcagcgggtaatgctacagtaaccctaacgtttgactctaaagccgatcca
gacatcgctcaggttcaggtgcaaaacaaactgcaactggctatgcctttgttaccccaa
gaagtacaacagatggggatcagcgttgagaaagccagcagtagcttcctgatggttgcc
ggtttcatctctgacgatggcagcctgagtcaggaagacatcgctgactatgtaggctct
aatattaaagatcctatcagtcggacgagcggcgtcggtgacgtacaattgttcggttca
cagtacgcgatgcgtatttggttagatcctaacaagttgaataacttctcattaacgcca
attgacgttaataacgccattaaagttcagaataaccagatcgctgccggtcagttaggt
ggtacaccacccgtgaaaggccagcagttaaactcatccatcattgtacagactcgttta
aaaacaccggaagagtttggtcagatcctgctgaaaatcaactccgatggttcacaggtt
cgtctgaaagatgttgcaaccatcgctctgggtggtgaaagctataacataatcgcacac
tacaatggtaaacctgcttctggtctaggtattaaactggctactggtgctaacgcactg
gatacatccgcagcggttaaaagcgaattagccgcattggaaaaattttctccaccaagc
ctgaaaatcgtttatccatacgacaccacaccatttattaaaatatccattaaagaagta
ttaaaaacactggtagaagcgattctgttggtctttatcgttatgtacctgttcctgcaa
aacctgcgcgcaacgctcattcctacgatggcagtgccggtagttttattaggaacgttt
gcggttttatctgcttttggttattcgataaacaccttgacgatgttcgctatggtgctc
gccatcggcctgttggttgatgacgccatcgtagtggtagaaaacgtagaacggatcatg
gtggaagaaggcctaccaccaaaagaagccacaaagaaatcgatggtgcagattcagggc
gcgttagtgggtatcgctctggtactgtcagccgtatttgtgccgatggctttcttcggt
ggctctaccggtgcaatttaccgtcaattctcaattactatcgtttctgcaatggtgtta
tcggttctggttgcgatgattctaacgccagcgctgtgtgccactctcctgaaacctgtg
gcaaaaggtagtcatggcgcaacaaaagggttctttggctggtttaacaatctgtttgag
cgaaacacccatcactataccaatagtgttgccaacattctgggtagtaccggtcgctat
attctgatctatctagttctggttgcgggcatgatattgctgtttatccgccttccctct
tccttcctgccagaagaagatcagggggtattcctgtcggcagttcaattgcctcagggt
gccactcaggaaagaacgctaaacgttctaagtgaagtcaccgattacttcctgactaaa
gagaaccacaatgttgcttcggtgtttaccgtgtctggtttcggttttagcggacagggc
cagaataccggtttagcctttgttagtttaaaggactggagcgaacgttcagggcgagag
aataaagtaccggccattgttggtcgtgcaacccagtcattctctaaaattaaagacggt
atggtgtttgcttttaaccttccggccattgttgaattaggtaccgcttctggttttgac
ttccagctcatcgatcaagctggtttaggccatgaaaaactcactgaagcacgtaatcaa
ctattcggtttggtggctaaacaccctgatatgttagttcgggttcgcccaaatggtctt
gaagatacgcctcagttcaaactggctatcgatcaagaaaaagcgcaggctctaggcgtc
tccattagcgatattaaccagacgttatcaaccgcgttgggtggatcttacgttaacgac
tttatcgaccgtggtcgtgtgaagaaggtttacgttcaggctgatgcgccattccggatg
ataccaaaagatatcgataactggttcatccgtggtgcaaacggtcagatggtccccctt
tctgccttctccagcgcacattggcagttcggctcaccgcgtctagaacgttacaacggt
ctaccttctatggagatcttaggtgaagccgcaccaggcaagagtagtggtgatgcgatg
aaactgatggaagacttagcgtctcagttacccgttggtattggttatgactggaccgga
atgtcttatcaggaacgtttatccggtaatcaggcgccatcgctatatgccatttcactg
attgtggtattcctgtgtctggcggcactgtatgaaagctggtcaattccgttctcggtt
atgctggtggttccgcttggggttatcggtgcattgctggcaaccacggtacgcggcatg
gagaacgacgtttactttattgtaggcttgttaaccaccgtcggactctcagcgaagaac
gccatcttgattgtagagttcgccaaagatctgatggacaaagaaggtaaagggctgatt
gaagcaacgctggattcggtacgtatgcgtttacgtccgattctgatgacttctctggcc
tttatgcttggggtactgccgctagctctcagtaccggggctggttccggctctcagaac
gcggtaggtaccggggttctaggcggtatgatcagtgcgaccatactggcaatcttcttc
gtaccggtgttctttgtagtggtgcgtcgccgctttagtaaacgcggtgaagatatcgag
catacacatgcgattgagcataaatcctaa
DBGET
integrated database retrieval system
