Lacticaseibacillus rhamnosus ATCC 8530: LRHK_1366
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Entry
LRHK_1366 CDS
T01961
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lra
Lacticaseibacillus rhamnosus ATCC 8530
Pathway
lra03030
DNA replication
lra03430
Mismatch repair
lra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LRHK_1366 (dnaE)
03430 Mismatch repair
LRHK_1366 (dnaE)
03440 Homologous recombination
LRHK_1366 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lra03032
]
LRHK_1366 (dnaE)
03400 DNA repair and recombination proteins [BR:
lra03400
]
LRHK_1366 (dnaE)
Enzymes [BR:
lra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LRHK_1366 (dnaE)
DNA replication proteins [BR:
lra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LRHK_1366 (dnaE)
DNA repair and recombination proteins [BR:
lra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LRHK_1366 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AER64149
LinkDB
All DBs
Position
1306834..1310130
Genome browser
AA seq
1098 aa
AA seq
DB search
MTFTQLQVHSNYTLLHSPLALPDLIQAAKNRGYSAVALTDTNVVYGLVEFYRQAKAAGLK
PLLGMQIEIADAKLLVIAENNTGYHQLLKLSTQIMLAQQPLAFADLLPLNGLAAVTLPDS
PFGVAVSERHEDQAQTFLTTLKAKQPSSLYIGVDEEHLEGTLPAFADTVKLPLLALGNVL
YRDPTDAFTQKVMVAIETGSQLNFRDPVLTDAGPAWLKPPTDAAKPFVQAGLQAAVTQTE
AIAARADVTIDFKQPQLPHYQTPDQTPSKDYLTKLAESGLAKRFHGQSIPPAYQDRLQYE
LRVIIEMGFADYFLVVWDVMNYAHKVNIMPGAGRGSAAGSLVSYALAITEVDPIEYNLLF
ERFLNPARAQMPDIDLDIPDNRRGELIQYVHDKYGKNHMAQIITFGTFGAKQAIRDVARV
FGLSQFESNTWSKAIPNLFHIDLKTAYEQSQPLKNLVADSPKNRMLFQTALALEGLPRHY
STHAAGIVLSEEPLTDTVALQPSGDGLEQTQVPKDDVEALGLLKMDFLGLKNLNILAAAS
HFVTRDTGKPFDPKAIPLDDQPTLALFARGDTNGVFQFESSGIKNVLRKLRPTAFEDVVA
VNALYRPGPMENIDTFIARKNGQEPIAYPDPALAKILRPTYGVLVYQEQVMQVANVMGGF
SLGEADLLRRAMSKKKSSVLAAEQDKFIEGALKQGFPEATAKTVYAYIDRFANYGFNRSH
AVAYSKVAFWLAYLKVHYPAAFFAALMNASMNNLPKLRTYVQEAKARKVGLLGPDINQSN
GGFKLSQGKIRFGLLSIKGMRRDFVEAIFAARKNGPFKDLRDLLQRLDPKWLKTDYYKAP
TLAGAFDQFSNNRAQTLANLDELINSVKLAGNDVGLFSMLAPKTIEVPEMPASERLEAEA
EVLGVYLSGHPVDKYAPLKTQYRLINVSDLEEGRAVDILLLVRHIKRIRTKTGKPMAFID
GQDATGNVSLTIFPNLYPTIENLSEDMVVLVNGRVEKRNDDLQLVVNRIQDAQPLLANLP
TAELFIRMDAKDTAMRTDLLKKLQAAHGTTPVITVDTATRESILLDKRYWVKAQTELIDA
LKTQFGANNVVLRKRQET
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttacccaattacaggttcacagcaattataccttattacacagccctttggca
ctgcctgatttgattcaggccgcaaaaaatcggggttattcggccgtggcattaactgac
accaatgttgtttatggcctggtagagttttatcggcaggcaaaagcggcggggttaaag
ccgttattagggatgcaaatcgaaattgccgatgccaagttgcttgtgattgccgaaaat
aataccggttatcatcaattgttgaaactctcaacccaaattatgcttgcccaacagccg
cttgcatttgctgatttgctgccgctgaatgggctggcagccgtaacattgcccgattca
ccttttggcgtggcagtttctgagcgtcacgaagatcaggcacagacttttctgacaacg
ttaaaagctaagcaaccaagctccttgtacattggtgtggatgaggaacatcttgaagga
acattgcctgcgtttgcggacaccgtaaagttaccgttacttgctttggggaatgttttg
taccgcgaccccaccgacgcctttacgcaaaaggtgatggtggcgattgaaacaggaagt
cagttaaactttcgcgatccggttctaacggatgccgggccagcgtggttaaaaccgcca
accgatgcggccaagccgtttgtgcaagccggcttgcaagcggcggtgacacagactgaa
gcaattgctgcgcgtgccgatgtgacgattgactttaaacagccccagttaccgcactat
cagacgcctgatcaaacgccttcaaaagattatttgaccaagttggctgaatcgggtttg
gccaagcgctttcatgggcagtcgattccgccggcttatcaagatcggttgcagtatgag
ctgcgggtcattattgaaatgggtttcgcggactattttttggttgtctgggacgtgatg
aattatgcgcacaaggtcaacattatgccaggcgccggccgtggttctgcagcaggttct
ctggtgagctatgcattggccattactgaagtcgatccaattgaatataatctgttattt
gaacgatttctcaatcctgcccgagcgcaaatgccggatattgacttggatattcctgac
aatcggcgcggtgagttgattcagtatgttcacgacaaatatggcaagaatcatatggct
cagatcattacattcgggacttttggggccaagcaggcaattcgcgatgtcgcccgggtt
tttggcctgagtcaatttgaaagcaatacctggagtaaagctattcctaacttatttcat
attgatttgaaaaccgcgtacgaacaaagtcagccattgaaaaatctggttgccgattcg
ccaaaaaatcggatgctttttcaaacagctttggctttggaagggttgccgcggcattat
tcaacccatgcggctggcattgttttgtcagaagaaccattgactgataccgtcgcgctc
cagcctagtggcgatggactcgaacagactcaggttcccaaagacgatgtagaagcactc
ggattgttgaagatggactttttaggtttaaaaaacctcaacatcttggcagcagcaagt
catttcgtcacccgcgatacaggcaagccgtttgaccccaaagcaatcccgcttgatgat
caacccacgctggcgttatttgcgcgtggcgacacaaatggggtcttccaatttgagtca
tccggcatcaaaaacgttttacgcaaactacgaccaactgcttttgaagatgttgtagcg
gtcaatgccttgtatcgtcccgggccgatggagaacattgataccttcattgcgcgcaaa
aacggtcaggagccaattgcctatccggacccagcgctggccaaaatcctaaggccgact
tatggcgtcttggtttatcaggaacaagtcatgcaggttgccaacgtcatgggtggtttc
agtcttggtgaagcggatttgcttcggcgggcgatgagtaagaagaaatcttccgttcta
gctgcggaacaggataaatttattgaaggtgcccttaagcaaggcttcccggaagcaacc
gcgaaaaccgtgtatgcttacattgatcggtttgctaattacgggttcaatcggtcacac
gcggtggcttacagtaaagtggcgttttggctggcttatctcaaagttcactatcctgcc
gcctttttcgcggcattgatgaacgccagcatgaacaacctgccaaagctacggacgtat
gtacaggaagctaaagcgcgcaaagtggggttacttggtccggatatcaatcaaagcaat
ggcggctttaaattgagccaaggaaagatccgctttgggttactatcaattaaaggcatg
cggcgggattttgtcgaagccatttttgccgcccgcaaaaatggaccgttcaaggacctt
cgtgatttattacaacggcttgatcctaagtggttgaaaaccgactactacaaagcacca
acgcttgccggcgcttttgaccaattcagcaataaccgtgcgcagacgctggctaatttg
gatgagctgattaattccgttaagttagccggtaatgatgtcgggttattttcaatgtta
gcgccaaagaccattgaggttcccgagatgccggcgagcgagcgcttagaggcagaagca
gaagtgctcggggtttatctctccgggcatccggttgataagtatgccccgctaaagacc
cagtatcgccttattaatgttagcgatcttgaagaaggacgagccgttgacatcttgcta
ttagtacggcatatcaagcggattcgaaccaaaaccggtaaacccatggcatttatcgat
ggtcaggatgcgaccggtaacgtgtcattaacaatctttcccaatttgtatccaacgatc
gagaatctttcggaagacatggttgtattagtcaatggccgggtcgagaagcgcaatgat
gatttgcaattggtggtcaatcggattcaggatgcccagccattgttagccaacttgccg
accgcggaattgttcattcgcatggatgccaaggatacggcgatgcgaaccgatttactg
aaaaaactgcaagctgctcacgggacaacccccgtcattacggttgatactgccacccgc
gaaagcattttgctggataaacgttactgggtcaaggcgcagacggaactgatcgatgcg
ttaaagacacagtttggcgcgaacaatgttgtgttaagaaaacggcaggaaacctag
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integrated database retrieval system
