Lacticaseibacillus rhamnosus LOCK908: LOCK908_0102
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Entry
LOCK908_0102 CDS
T02731
Name
(GenBank) Transcriptional regulator, xre family
KO
K20373
HTH-type transcriptional regulator, SHP2-responsive activator
Organism
lrc
Lacticaseibacillus rhamnosus LOCK908
Pathway
lrc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lrc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LOCK908_0102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrc03000
]
LOCK908_0102
Transcription factors [BR:
lrc03000
]
Prokaryotic type
Helix-turn-helix
Other families
LOCK908_0102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rgg_C
HTH_3
HTH_19
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AGP72789
LinkDB
All DBs
Position
112861..113742
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AA seq
293 aa
AA seq
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MQNDNVGAYFREIRKRRELGIEQVRGNLHQSTISHFERDHDDITVRNLLQILQPTFTTPE
EFCLLINGQDESISSILKNISEYYDQLDIAGLRAFSAAFEQAHPMTAPVRLILLILESCV
KELAGEDPLLSAEDCDYVQDYLLQPGKWFSFEYVVFGNLASSLPGEVNLRLWKKMLTSFR
EFHLATYDELLVNILYNVAASFLSQDDLSSAAYLLQSLDLSKVDHYVLYVRHHVAFLKLV
LSYRLDPQNKQNNENLKVFLLGTRIVDEALFKKNVDALKELNVDVHTILPSET
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatgataacgttggggcttattttcgagagattcgtaaacgacgagaattagga
atcgaacaagtgcgaggaaatttgcatcaatcaactatttcgcacttcgaacgcgatcat
gatgacattactgtccgcaatttacttcagatccttcagccgacttttacaacacctgaa
gagttttgtttacttatcaatggtcaggatgaatcaatttccagtattctcaagaatata
tctgaatattacgatcaacttgacatcgccggtttaagggcattttcagccgcatttgaa
caagcgcaccctatgactgcacctgttcgcttgatcttgttgattcttgaaagttgtgtg
aaggaattggcaggtgaagatccccttttgtcagccgaagattgtgattatgtacaagat
tatttgttgcagccagggaaatggtttagttttgagtatgttgtttttggtaatcttgcc
tcatcactacccggtgaagttaacttgcgactttggaagaagatgttgacttcttttcgt
gagtttcacttggccacgtacgatgaactgctcgtcaacattttgtacaatgttgctgct
tcttttttgagtcaagacgatttgtcatcagctgcgtatctcctgcagtcgctggattta
tccaaggtagatcattacgttctttatgttcgtcatcatgttgcttttttgaagctagtt
ttgagttatcggctagatccccaaaataagcaaaataatgagaatctcaaagtattctta
ttaggcactcgaatagttgatgaagcacttttcaaaaagaatgttgatgctttgaaggaa
ctgaatgttgatgttcatacaatcctgccatcggaaacgtga
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