Lolium rigidum (rigid ryegrass): 124648343
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Entry
124648343 CDS
T09103
Name
(RefSeq) ABC transporter B family member 5-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124648343
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lrd02000
]
124648343
04147 Exosome [BR:
lrd04147
]
124648343
04090 CD molecules [BR:
lrd04090
]
124648343
Enzymes [BR:
lrd01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
124648343
Transporters [BR:
lrd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
124648343
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124648343
CD molecules [BR:
lrd04090
]
Proteins
124648343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
ABC_ATPase
SMC_N
AAA_22
AAA_29
Zeta_toxin
AAA_16
RsgA_GTPase
DUF87
AAA_21
AAA_30
APS_kinase
AAA_15
AAA_24
P-loop_TraG
Motif
Other DBs
NCBI-GeneID:
124648343
NCBI-ProteinID:
XP_047044083
LinkDB
All DBs
Position
4:complement(227622664..227628733)
Genome browser
AA seq
1266 aa
AA seq
DB search
MGKGEEAGEEKGRKKMTKGGKAPFHDMFKNADVTDMVLMLVGTVAAVGSGMSQVVMTIIF
GRMIDAFGGATPDTILPRVNKVVLQFVYLAIGTLPACFLEISCWTMTGERQAARIRSLYL
NSVLKQDMPFFDTEMKSGHVVSGISADTILIQDAIGEKVGKFLQLITTFIGGFIVAFIKG
WLLTIVMLCTIPPLAVAAGIISKMLSKVSSEGLASYVDAGNIVEQTIGSIRTVVSFNGEK
KTMDLYNNLIKKAYKGTVKEGAIKGFGMGFLSFVYLSSFGLIIWYGSKLTLSKGYSGGDI
MNILFAVIIGARSLGDATPCIAAFEEGRVAAYRLFTTINRKPEIDYDDTTGIVLEDIKGD
VELRDVSFSYPSRPEQVIFGGLSMHVSSGTTMAIVGESGSGKSTVINLVERFYDPQAGEV
LIDGMNIKRFKLDWIRGQIGLVNQEPMLFMTSIKENITYGKEDATLEEIKRAAELANAAR
FIENLPNGYDTTAGQRGAQLSGGQKQRIAIARAILKNPKILLLDEATSALDLGSERAVQE
ALNKIMVGRTTIVVAHRLSTVRNAHCISVISGGKIVEQGNHDKLVKDPAGAYSQLTRLQE
AHGGINAGVSGPLSERSQSLERSISRSPGGSGRHSLILPVSLPGTNDGADGEKQNKNTDG
QPSKKAPMGRLFGLNKPEMAVLLFGSLAAIIDGTVYPMMGLVMASAAKIFYELPTDKRQK
DSIFWGLLCVGLGAVALISKLANSLLFEIAGGKLVERIRALTFQSLLYQEAAWFDHPANS
SGALGGRLCTDALNVRRLVGGNLALMVQCTASFLCGLVIAMIADWKLSLVILIVIPLMGV
QGYAQVKFLEGFSQDAKTMYEEASQVATEAVGSIRTVASFCAEKRVMTIYNQKCQASKDQ
GIRTGIVGGLGFGFSYMILYATSSLCYYVGAKFISQGNSTFGSVFQANFALVLAMIGASQ
TSAMASDSTKAKDSANSIFMILDRKSQIDSSSGEGSTMKLVKGDIDFMHISFRYPSRPDI
QIFSDFNLSVPSRKTVALVGQSGSGKSTVIALLERFYDPDSGVILLDGVEIKSLKLSWLR
DQMGLVSQEPVLFNDTIRANIAYGKHEEVTEEEIAVAAKAANAHEFISSMPHGYSTAVGE
RGSQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEHIVQDALDRMMVGRTTIIVA
HRLSTIQGADIIAVLKDGAIVEKGTHEALMGTEGGAYASLVKLRPVQHDARLGPGNQLEL
LECTAA
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggggaagggtgaagaagcaggggaggagaaaggcaggaagaagatgaccaagggtggc
aaggcgccgttccatgacatgttcaagaacgcagatgttaccgacatggtgctgatgctg
gtcggcacggttgccgcggttggaagtggtatgtcacaggtggtcatgacgatcatcttt
gggcggatgatcgatgcctttgggggtgccacccccgacaccatccttccgcgagtcaac
aaggtggttctccagtttgtgtacttagccattggaacattgcctgcttgttttctcgag
atatcatgctggaccatgactggggagagacaggcagctcgcattcgatctttgtatctc
aactcagttttgaaacaagatatgccgttctttgacacggaaatgaaaagtggacacgta
gtctccggtatatctgctgatacaatactaattcaagatgctattggtgagaaggtcggg
aagtttctacagcttatcaccactttcattggtgggtttattgtggcattcatcaaaggc
tggctcctaaccattgtaatgctttgtactataccaccattagcagttgcagctggaatc
atctcaaagatgctttccaaagtatctagcgagggcctagcatcatacgtcgatgcagga
aatattgtagaacagacaattggatccataagaacggtggtttcattcaacggtgaaaag
aaaaccatggacctatacaacaatctcataaagaaagcatacaagggcaccgtcaaggaa
ggggctattaaaggtttcggcatgggtttcctttccttcgtctatttgtccagctttgga
ttgattatatggtatggtagtaagttaactctcagcaaaggatatagtggaggggatatc
atgaacatattgttcgctgtcattataggagcaagatcattgggtgatgcaaccccctgc
attgctgcctttgaggaaggaagagttgccgcttacagattgtttacaacaatcaacagg
aaaccagagattgactatgatgatactaccggtattgtgttagaagacatcaaaggtgat
gtagagctgagggatgtgtctttcagttacccaagcaggccagagcaagtaatatttggt
ggactttcaatgcatgtatcaagtggcacaacaatggccatagttggggagagtgggagt
ggaaaatcaactgtgatcaatctggttgagagattttatgatccacaggctggtgaagtg
ttgatcgatggaatgaacatcaagagatttaagttagactggataagagggcagattggc
cttgttaaccaggaaccaatgctcttcatgacatccatcaaggagaacataacctatgga
aaagaggacgcaacacttgaagagatcaagagagcagctgagcttgccaatgcagcaagg
ttcatcgagaatttgcctaatggttatgacacaacagctggacaacgtggtgctcagctt
tcaggggggcagaagcaaaggattgcgatcgcgagagccatcctaaaaaatccaaaaatc
cttttgctcgatgaagcgactagtgctttggatttgggctctgagagggcagttcaagaa
gcactaaacaagatcatggttgggagaacaacaattgttgtggcacaccgtctgagcact
gttagaaatgctcactgcatctcagttatttctggaggaaaaatagtcgaacaaggaaat
catgataaattggtaaaagatcctgctggggcgtactctcagcttactcggctacaagag
gcacacggggggataaatgctggagtatcaggtccattatctgaaagaagtcaatcactc
gagcgatcaattagtagaagtccaggtgggagcggtcgtcattctttaatcctccctgtg
agcttgcctggcaccaacgatggtgcagatggtgagaaacaaaacaagaacactgatggc
caaccatctaagaaggccccaatgggccgcctatttggcctaaacaaaccagaaatggca
gttcttttatttggttctcttgcggcaataattgatggaactgtctacccaatgatgggt
ttggtaatggccagtgccgcaaaaatattctatgaattaccaacagacaagcgacagaaa
gattctatcttttggggattgctatgtgttgggctgggcgccgttgcattgatatcaaag
ctagcaaatagccttctatttgaaatagcaggtggaaaacttgtagagcgcattcgtgct
ttgacatttcaaagcttactgtaccaagaggctgcttggtttgatcatcctgcaaattct
agtggagcacttggtggaaggctatgtacagatgcccttaatgtgagacgtcttgtaggt
ggtaacttggccttaatggtccaatgtactgcatcatttctttgtggacttgtaatagca
atgatcgcagactggaagctttcattggtcatcttaattgtaattcctttaatgggtgtc
cagggttatgcccaagttaagttcctagaggggttcagtcaagatgccaagaccatgtat
gaagaagcaagtcaagtggcaactgaagcagttggtagcatcagaacagtagcatctttt
tgcgccgagaagagagtgatgacaatatacaatcagaaatgtcaagcttctaaagatcaa
ggaattagaactggaatagtcggaggtcttggctttggtttctcatatatgattctgtat
gccacttcttctctatgttactatgttggtgcaaagtttattagtcaaggcaactctact
ttcggtagcgtcttccaggctaactttgctctagttttggccatgattggagcatcacaa
actagcgctatggcttctgattcaaccaaggcaaaagattctgcaaattccatattcatg
attttagatagaaaatctcaaatcgattccagcagcggggaaggttcaaccatgaagctt
gtcaagggtgacattgactttatgcatatcagcttcagatacccatcgcgtccagatatt
caaatattcagcgactttaatttgagcgttccctctagaaagactgtcgcgcttgttggc
caaagtggcagcgggaaatctacagtaattgctttgctagagcgtttctatgatcctgat
tctggtgtaatccttttggacggagtggaaatcaaaagcctaaagctcagttggttgagg
gaccagatgggattggtaagccaagaaccagtactgttcaacgacacgatacgagccaat
atagcatacggaaagcatgaagaggtaaccgaggaagagattgctgtggctgctaaagca
gccaatgcccacgaattcatatcaagcatgccacacgggtacagcacggcagttggagag
agaggaagccagctatccggcgggcagaagcagcgcatagctattgcaagggccatcctc
aaggacccaaggatactgcttctggacgaggcgacgagcgcgctggatgccgagtcggag
cacatcgttcaggacgcgttggatcggatgatggtcggcaggacgaccatcatcgtggcg
caccgcctctcgacgatccaaggagctgacataatcgcagttctgaaggacggcgcgatc
gtggagaaagggacgcacgaggccctgatgggcacggaaggaggagcgtatgcttcgctt
gtaaaacttcgcccagtgcaacatgatgcaaggcttggaccagggaatcaactcgaacta
ctggaatgtacggcggcttag
DBGET
integrated database retrieval system
