Lolium rigidum (rigid ryegrass): 124660171
Help
Entry
124660171 CDS
T09103
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124660171
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lrd02000
]
124660171
04147 Exosome [BR:
lrd04147
]
124660171
04090 CD molecules [BR:
lrd04090
]
124660171
Enzymes [BR:
lrd01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
124660171
Transporters [BR:
lrd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
124660171
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124660171
CD molecules [BR:
lrd04090
]
Proteins
124660171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA_22
AAA_16
AAA_29
AAA
ABC_ATPase
RsgA_GTPase
AAA_21
AAA_15
AAA_30
Motif
Other DBs
NCBI-GeneID:
124660171
NCBI-ProteinID:
XP_047053924
LinkDB
All DBs
Position
6:complement(117895079..117900299)
Genome browser
AA seq
1230 aa
AA seq
DB search
MSSAPASTGGGERRSIRGLFKFADRVDVLLMVLGTLGAIGDGCSTNLLLIFASDVMNSLG
RGHAQQQGRAGSVDFMHDIEKSCLNFVYLAFAILVVASMEGYCWSRTSERQVLRIRHLYL
QAILRQEVAFFDSQEATTSEIINSISKDASLIQEVLSEKVPLFLVHSTVFVSGLAFSTYF
SWRLALVSYPLVLLLIIPGLIYGKYLLYLSRESRREYAKANSLVEQALSSIKTIYSFTAE
KGIIQKYTAILDRTINLGIKQGIAKGLAVGFTGLAFAIWAFLAWYGSRLVMYHHESGGRI
YAAGISFVLGGLALGMAIPELKHFIEASVAATRILERINRVPQINDDDPEGLVLDQVRGE
LEFESVRFVYPSRPNMTILKDFNLQIPAGQTIALVGSSGSGKSTAIALVQRFYDATEGTV
KIDGVDIKKLKLKSIRSKMGLVSQDHALFGTSIKENILFGKPDATMDELYAAAMTANAHN
FIRGLPEGYETKIGERGALLSGGQKQRIAIARAVIKNPAILLLDEATSALDSESEKLVQH
ALDQASMGRTTLVVAHKLSTVKNANQIAVVDGGTIAEIGTHEELINKGGPYSRLVKLQKM
VSYIDQESDQFRASSAARTSASRLSMSRASPMPLTPGVLKETGSHVSPPAPSFSRLLAMN
APEWKQAVIGSMSALVYGSLQPIYALTIGGMIAAFFVQDRNEMNAIISRYAMIFCSLSVV
SIVVNLLQHYNFAYMGEHLVRRIRVQVLEKILTFEAAWFDEDTNSSGSLCSRLSDESSLV
KTLVADRISLLLQTACGIVIAVTMGLVVAWKLALVMIAVQPCTMICYYAKKIVLSNVSRD
LAKAQYQSTQIAIEAVYNHRMVTSFGCSSKILQLFEHTQEGPLRKARKKSWVAGITTGLS
PCLTFLSWALDFWYGGKLAQSGEITAGDVFKTFFVLVSTGKLIADAGSMTSDLAKGANAV
ASVFEVLDRKSISPQNSQVEKDDPKSKIQGRIEFKKVDFAYPTRPECLILQDFSLDVKAG
TSIGLVGRSGCGKSTIIGLIQRFYDVDRGAVRIDGMDVREMNILWFRGFTALVSQEPAMF
SGSVRDNIAFGKPEADEEEIVEAAKSANAHEFISSLKDGYNTDCGEHGIQLSGGQKQRIA
IARAIIRNPAILLLDEATSALDAQSEQVVQEALDRIMSGRTTIVVAHRLNTIKNADSIAF
LGEGKVIERGTYPQLMNKKGAFYNLATLQK
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgccccggcgagcactggcggcggagagcggcggagcatccgcggcctgttc
aagttcgcggatcgggtggatgtcttgctcatggtcctgggcacgctgggtgccatcggc
gatgggtgctccaccaacctcctcctcatcttcgccagcgacgtgatgaactcgctgggg
cgcggccacgcccagcagcagggccgtgccggcagcgtggacttcatgcatgacatcgag
aagtcgtgcctgaacttcgtctacctggccttcgccatcctggtggtggcgtccatggaa
gggtattgctggagccggacgagcgagaggcaggtgctccggatcaggcacctgtacctg
caggccatcctgcggcaggaggtggccttcttcgactcgcaggaggccaccacttcggag
atcatcaacagcatctccaaggacgcatcactcatccaggaggtcctcagcgagaaggtt
cctctatttcttgtgcactctacagtctttgtctctgggctggccttctccacctatttc
tcatggaggctggctctggtttcttaccctctagtcctgctcctcatcatccctggtctc
atctacggcaagtacctcctgtatctctcccgcgaatcgcgccgtgagtacgccaaggca
aactccctggtcgagcaagcactcagctccatcaagaccatttattcattcaccgcagag
aaaggaataatccagaagtatacagcaatccttgacaggaccatcaacctggggatcaag
cagggcattgccaaaggtctcgctgtaggattcactggccttgctttcgccatttgggcc
ttcctcgcctggtatggcagtagattggtgatgtaccaccatgaaagtggaggaaggata
tacgctgcaggaatctccttcgttctgggtggcctagcccttggaatggcaatcccagag
ctgaaacatttcattgaggcttccgttgctgccacgagaattctcgaacggataaaccgt
gtgccacagatcaacgatgatgacccagaggggcttgttttggatcaagtccgcggcgag
ctcgagtttgaatctgtccgctttgtgtacccatcaaggcctaatatgacaatcctcaaa
gacttcaacctccagattcctgctggccaaacaattgctttggtcgggtctagtggcagc
ggcaagtctaccgcaatagcactggtgcagcgcttttatgatgccactgaaggaactgtc
aagatcgatggcgtcgacattaagaaactgaagctcaagtcgatcaggagcaagatggga
cttgtcagccaagatcatgcactgttcggcacgtccataaaggagaacatcttatttgga
aagccagatgcaaccatggatgaactgtatgcagcagccatgacagcaaacgctcacaac
ttcataagggggcttccagagggatatgagaccaagattggtgagcgtggagcattgcta
tcaggtggtcaaaagcagcgcattgccatcgcaagggcggtcatcaagaaccctgctata
ttgttgcttgatgaagccacaagcgcacttgactcggaatcagaaaagctggtgcagcat
gcacttgatcaagcatctatgggaagaacaacactggttgtagctcacaagctttccacc
gtaaagaatgccaatcagattgcagtagttgatgggggtaccatagctgaaattggcaca
catgaggaattgattaacaagggtggcccatattcacgacttgtgaagttgcagaagatg
gtgagctacattgatcaagaaagtgaccaatttagggcctcttctgcagccaggaccagt
gccagccgtctcagcatgtccagagcaagtcccatgccacttacgccaggtgttttaaag
gaaactgggtcacatgtttcccctcccgcgccatctttctccaggcttcttgcaatgaat
gcaccagagtggaaacaagcagtcataggcagcatgtctgcattggtatatggttcgttg
cagcccatctatgctctcaccatcggaggtatgattgctgcattctttgttcaggaccgc
aatgagatgaatgcaattatcagccggtacgcaatgatattttgttcattgtccgtcgta
tccatagttgttaatctattgcaacactacaatttcgcctatatgggggagcatctagtt
aggcgcatccgagtccaagtacttgaaaaaatcttaaccttcgaggcagcatggtttgat
gaagacactaactcaagtggttcactgtgctctcggctaagtgatgagtcttctcttgtt
aaaacccttgttgcagacagaatatccctgctacttcaaacagcttgtggtattgtaatt
gcagtgacaatgggcctagtagtagcatggaaacttgctcttgtcatgattgctgtgcag
ccctgtacgatgatctgctactatgccaagaagatagttctctcaaatgtgtcaagggac
ttggcaaaggcgcagtaccaaagtactcagattgccatagaagctgtttacaaccacagg
atggtaacctcatttggatgctcatcaaagattcttcagctcttcgagcatacgcaagag
ggaccactgaggaaagcaaggaagaagtcgtgggtagcggggataaccacagggctgtca
ccttgcctcacattcttatcatgggcactggacttctggtatggcgggaaattggcacag
tctggggagatcacagcgggtgatgtcttcaaaacctttttcgtcttggtaagcacagga
aagctgattgctgatgctggcagcatgacttccgacctggcaaagggagcaaacgctgta
gcctcagtgttcgaggtgctagataggaaatctatctctccgcaaaattcacaggtggaa
aaggacgatccaaagagcaaaatacaaggaagaatagagttcaaaaaggtagatttcgca
tatccaacaagaccagaatgcctaatcctgcaggattttagcttggacgtcaaagcagga
acaagtattggcctggtgggtagaagtggatgtggcaaatctactatcataggtttgatc
cagaggttctacgatgttgatagaggtgctgtaaggatcgatggtatggatgtgagggag
atgaatattctttggtttcgaggatttaccgctctagtcagtcaggaacctgcgatgttt
tctggtagcgtcagggacaacattgccttcggtaagccagaagctgatgaagaagagatt
gtggaagctgctaaatcggcaaatgcacatgagttcatctcatctctgaaggacggatat
aacactgattgtggagagcatggtatacaattatcaggaggacagaagcaaagaattgca
attgcgagggcaataatccgcaatccagctatactactacttgatgaagcaacaagtgct
ctcgatgcacagtcagagcaagtggtgcaggaggcacttgatcgaatcatgtcagggagg
actacaattgtggtggcacatcgactaaacacaatcaagaacgcagactcaatagccttc
ttaggagagggcaaggtgattgagcgtggtacttatccacagctcatgaacaagaaggga
gcattctataacctggcaacccttcagaagtag
DBGET
integrated database retrieval system
