Lolium rigidum (rigid ryegrass): 124667123
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Entry
124667123 CDS
T09103
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
lrd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124667123
03015 mRNA surveillance pathway
124667123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124667123
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124667123
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
124667123
NCBI-ProteinID:
XP_047060407
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All DBs
Position
6:complement(21169629..21174647)
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AA seq
406 aa
AA seq
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MAKPRRGRSGSRSSSGSSSRSASSGSGSSRSRSRSRSLSSSSPSRSRSPPAAKRSSPGAR
KGRSPSPAPKKGSPSRKGRSPSPPPKKASPPRKSSPAPESVVLHVDHLSRNVNEAHLKEI
FGNFGEVVNVELSMDRIVNLPRGYGYVEYKKRADAEKALLYMDGAQIDGNVVKLRFTLTP
RQKPSSPTKPLPPPPKRDAPQNDKGAASVEKDAQQRPREPSPRRKPPSPPRKRSPPIRRG
DSPIRRRPDPSPVRRGRPGSPIRRRSPSPPRRHRSPMRRGRGSPSPRRRSPGPLRRSPGP
PRRRSPPPRRMRSPPRRPPPPPPRRHSRSPPPRRPLHSRSRSISPRRGRGPPLRRGRSDS
SYSASPSPPRKGPRRVSRSRSPRRGPRGRSSSGSGSSSSPSPRPRK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccccgccgcggccgctccggctcgcggtcctcctcgggctcctcctcccgc
tccgcgtcctccggctccggctcgtcccgctcgcgctcccgctcccgctccctctcctcc
tcctccccgtcccggagccgctcccctcccgccgccaagcgcagttcacctggagcgcgg
aaaggtcgatctccttcaccagcccctaaaaaaggttcaccatcaaggaaaggccgctca
ccatcacctccacctaaaaaagcttcacctcctaggaaatcatctcctgctcctgagtcg
gttgttctacatgttgatcatctatccaggaacgttaatgaggctcatttaaaagagata
tttggaaattttggcgaagtggtgaatgtggagctatcaatggaccgaattgttaatctt
cctcgtgggtatggatatgttgagtacaagaagagggctgatgctgagaaggctcttctt
tacatggatggtgctcaaattgatggaaatgttgttaagttgagattcacgctgacacca
cgccaaaagccttcttcacctacaaagccactgccccctcctccaaaaagagatgctcct
cagaatgataaaggtgctgctagtgttgaaaaggatgcccagcagcggcctagggaacca
tctccacgaagaaagccaccttcacctccgcgtaagcggtctcccccaattcgtcgtggt
gattctccgattcgtcgtcgaccagacccatcccctgttaggcgtggtagaccaggatct
ccaattagaagacgttctccttcaccacctagaaggcataggtcaccgatgaggaggggt
cgtggcagcccatcaccacgcagacgctcccctgggcctcttaggcgctcacctgggcct
cctagaagacggtcaccacccccaaggagaatgagaagccccccaagaaggccaccacca
ccacctccacgtcgtcatagtcgttcccctcctcctcgccgccctcttcactctcgctcc
agatcgatttctcctcgcaggggccgagggcctccactgaggcgtggaaggtcagattca
tcctattctgcatcacccagtcctccaaggaagggaccaagaagggtatcaaggagccgc
agtcctagaaggggtcctagaggaaggagctccagcggtagcgggagcagcagctcacct
tcccccaggccacgcaagtag
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