KEGG   Lolium rigidum (rigid ryegrass): 124673045
Entry
124673045         CDS       T09103                                 
Name
(RefSeq) SKP1-like protein 4
  KO
K03094  S-phase kinase-associated protein 1
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03083  Polycomb repressive complex
lrd04120  Ubiquitin mediated proteolysis
lrd04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    124673045
   04120 Ubiquitin mediated proteolysis
    124673045
  09126 Chromosome
   03083 Polycomb repressive complex
    124673045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lrd04131]
    124673045
   04121 Ubiquitin system [BR:lrd04121]
    124673045
   03036 Chromosome and associated proteins [BR:lrd03036]
    124673045
Membrane trafficking [BR:lrd04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    124673045
Ubiquitin system [BR:lrd04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Adaptor protein
     124673045
   Cul7 complex
     124673045
Chromosome and associated proteins [BR:lrd03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     124673045
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     124673045
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 124673045
NCBI-ProteinID: XP_047065135
LinkDB
Position
7:complement(299525757..299527418)
AA seq 164 aa
MCVLAFIALRMVLLVSSDGEEFEVADEAIGKASGMIKGCLDEDCATNGQVPIPNVTGRIL
SRILEYVNKHFSEPHDDFQIPNADDPLKRFDDAFVQVDQDTLFDLITAANYLNINSLLDL
TCKAVADQMRGKTTEETRKHFNIVNDYTPEEEEEVRRENSWAFE
NT seq 495 nt   +upstreamnt  +downstreamnt
atgtgcgtgcttgcgttcatagcattgaggatggttcttctcgttagctccgacggggag
gagttcgaggtggcggacgaggcgatcggcaaggcttcggggatgatcaagggctgtctg
gacgaggactgcgccaccaacggccaggtcccgatccccaacgtcaccggccgcatcctc
tcccgcatcctcgagtacgtcaacaagcacttctccgagccccatgacgacttccagatc
cccaacgccgacgacccgctcaagcgcttcgacgacgcgttcgtccaggtcgaccaggac
acgctgttcgacctcatcaccgccgccaactaccttaacatcaatagcttgctcgacctg
acctgcaaggcggtggcggaccagatgaggggcaagaccacggaggagacccgcaagcac
ttcaacatcgtcaacgactacaccccggaggaggaggaggaggtccgcagagagaactcg
tgggccttcgagtag

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