Lolium rigidum (rigid ryegrass): 124674313
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Entry
124674313 CDS
T09103
Name
(RefSeq) LOW QUALITY PROTEIN: condensin-1 complex subunit CAP-D2-like
KO
K06677
condensin complex subunit 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrd03036
]
124674313
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
124674313
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
Cnd1_N
HEAT
Adaptin_N
PDS5
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
124674313
NCBI-ProteinID:
XP_047066307
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Position
7:334035576..334044716
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AA seq
1432 aa
AA seq
DB search
MAPPFVFPSTLRDLERDADGDDDGEPSLRPEAPIAVTALRAADLEEFVKGTSFDLSDKEL
FCIEEQDVFNSVYSIVRDFTCLPPALKFNLVEALRSNLSVLLPNIDSLSRASMSPSDGIP
ITDRIASHRNTLKIYSFFLLSIVLTQESSADSGTGAKVTTHGRKKNPVYAWNWEAQRGRI
MNLVATSLEVDLTLLFGPGGADERYLSFVSKCTFVLFENQSVLKDDETRNGLCRIIGAIA
TKHQRTSQTSASVLHLIHKYDFTVAYLMEAAAAAEKKFGDGSLAIXLIREIGRTDPKDYV
RDGAGADNVGRFLVELADRLPKLMSTNLGVLIPHFGGESYKIRNSLVGVLGKLAAKAFKD
VDGNNSAHSIRLRSKQAMLEILIERCRDVSAYTRSRVLQVWAELCEENAISIGLWNEVAS
VASGRLEDKSAIVRKSALQLLITMLQHNPFGPQLRTATFEATLEKYKEKLQGMESQSPEE
DEPVNDHQLGEMIVGQDESVSDSCLPSSQDQRDQDPMIADITNLEQIRALVASLEAGLRF
STCITSLMPILIQLLASSSATDVENTILLLMRCRQFQVEGSEAALRKMLPLVFSQDKSIY
EAVESAFIAIYTKRIPTETAKSLINLNIDCSIGDLAALENLVSSLVLKGEISSSTISALW
DYFCFNINGVRPVQCRGALSILCMAAKSSPSILGSHLQDIVDIGFGRWAKEEPLLARTAC
LALHRLSEEDKVKLLSTSTRVFAALQSLITSFSLPEKIWYAATEKAISAIYTLHPAPEIF
ATEIAKKSLNSVFSSSAMDGMSNGVELETQNGPFVSAVSATKLGRFLFVISHIALNHLVY
IETSVKKIQKQKPKNDKSQHTNEDSEVDASKNSEAQGINAELGLGATVDIAIESLAEQAE
REIVSCSCEKNLIGHCGPFLSKLCRNPTLLQKFPVLHASAKLALCILMIIDAEFCEANLQ
ILFTVAESAPSEIVRSNCTIALGDLAVRFPNLLEPWTEHIYARLGDPSASVRKNAVLVIS
HLILNDMMKVKGYINEMAVRVEDEDERISSLAKLFFHELSKKGSNPIYNLLPDILSRLCN
QHLKEETFRSIMQFLIGSIKKDKQMEALVDKLCNRFAGGNDVRQWEYISYCLSQLTYTEK
GLKKLIDNFKMFEHALSEDSVMNHFRSVIAKCKKFAKPELKVCIEEFEEKVSKVHEEKKE
QEATTRNAEAHKQKMGSIDRILVTKDVGQNDRKSAEEEASGEVIDPSVDNIAEDKETEEA
SEAVDPSVDGSNAEDKEIGESSEVADPSVVDRNAEDKETEEGSEVTGPSVDDSNTEDQET
GESTEVTGPSVNDGNAEDEETEEAADPSADDGNAEDKENMRERSDNISSEKSQPSSTCTE
LEDGSAEVQSARKPRRGSSRSTLKKIREPALEGPADSAAPVVRRSTRSSRRL
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggctccccctttcgtcttcccctcgaccctgcgggatctcgagcgggacgccgacgga
gacgacgacggcgaaccgtcgctccgcccggaggcccccatcgccgtcacggccctccgc
gccgccgacctcgaggagttcgtcaaaggcacttcatttgatctgtctgacaaagaactc
ttctgcatcgaggagcaagatgtgtttaatagcgtatactctatcgtgcgtgacttcact
tgcttgcccccagcccttaagttcaaccttgttgaggccttgcgctccaacctcagtgtc
cttctaccgaacattgactccctttcacgagcttccatgtccccttctgacgggatccct
atcactgaccgcattgcttctcaccgcaacaccctcaagatatactcctttttcctcctt
tccattgtcctcactcaggaatcttcagctgatagtggcactggggcaaaggtgacaaca
catggtcggaagaagaatcctgtttatgcttggaattgggaagcgcaaagagggcggatc
atgaatcttgttgccacttctcttgaagttgacctcacattactttttggtccaggcggt
gctgatgaaagatatctctcttttgtttcaaagtgtacttttgttctatttgagaatcaa
agcgtgttaaaagacgatgaaacaagaaatggcctatgccggataattggtgcaatagct
acaaagcatcaaaggacttctcaaaccagtgcatctgtcttgcatttgatccataaatat
gatttcactgtcgcctatcttatggaagcagctgctgctgcagagaaaaagtttggtgat
ggaagcttggcaattntcctgatcagggaaattggtcgcactgacccaaaagattatgtg
agagatggtgctggtgctgacaatgttgggcgattcctagtagaactcgcagatcggttg
ccaaaacttatgtctaccaatcttggtgttctgataccacattttggtggggaatcatac
aagattagaaactctcttgttggggtcttgggcaagttggctgcaaaggcatttaaagat
gttgatggaaataacagtgctcattccataaggctccgaagtaagcaggctatgcttgaa
attttgattgagcgttgtagggatgtgtcagcgtacacaaggagtcgagtgcttcaggta
tgggcagagttgtgcgaagaaaatgctatttcaattggcctgtggaatgaagtggcatca
gttgcttcagggagattggaggacaaaagtgcaattgtgaggaaatcggcattacaactt
ctcattacaatgctgcaacacaacccttttgggcctcaactaaggactgcaacctttgag
gcaactttagagaagtacaaggagaaattgcaaggaatggagtctcagtctcctgaggaa
gatgaacctgtgaatgatcatcaactgggagaaatgattgtgggtcaggacgagagtgta
agtgatagctgcctaccttctagtcaagaccagagggatcaagatccaatgattgcagat
ataacaaacttggaacagatccgagctttggttgcatcccttgaggctggtctgcgattc
tcaacatgtataacgtcgttaatgccaatccttatccagttattggcatcatcttcagct
acagatgttgagaacactattcttctattaatgagatgcagacagtttcaggttgaaggt
tcagaagcagcactcaggaaaatgctgcctctggtattttctcaggacaagtcaatatat
gaagcagtggagagcgcattcatcgccatatacacaaagagaatcccaacagaaacagct
aaaagcttgataaacctcaacattgactgtagcattggtgaccttgctgcactggagaac
ttagttagttcattggtattgaaaggagagatttcgtccagcacgatatcagctttgtgg
gattatttttgctttaacatcaacggcgtgaggccagtgcaatgccgtggagctttatca
attctttgcatggcagcaaagtcatctcccagcattctgggttcccatttacaagatatt
gttgacattgggtttggacgctgggctaaggaagaacctctgcttgctagaactgcatgc
cttgccttgcatagattatcagaagaagacaaggtcaagttactaagtaccagtaccaga
gtatttgctgcattgcaaagcttgataactagcttctcgcttcctgagaaaatatggtat
gcagcaacagagaaagctataagtgccatctataccttacaccctgcacctgaaattttt
gctaccgagattgcaaagaaatccctcaattctgtattcagttcctcagcaatggatggc
atgtcaaatggagttgaactcgaaactcagaatggtccatttgtttcagcggtatcagcc
acaaagttgggtagatttctttttgttattagtcatatagcacttaatcatttggtttac
attgagacttccgttaagaagattcagaaacaaaaaccaaagaatgacaaatcacagcac
actaatgaggacagtgaggtagatgcctccaagaattcagaggcacaaggcataaatgct
gaactgggacttggcgcaacagtagatattgcaatagagtctcttgctgaacaagctgaa
cgggagattgtttcctgttcctgtgaaaagaaccttattggacactgcggaccatttctt
tcaaaactctgtaggaacccgactttgttgcaaaagttcccagtgttacacgcttctgca
aagcttgctctttgcatactaatgattattgatgcagaattctgcgaagcaaatcttcaa
atcctatttactgttgctgaaagtgcaccctctgaaatcgtccgatctaactgcactata
gcccttggcgatttagcagttcgctttccaaacctcttagaaccatggacagaacacata
tatgcccgattgggcgacccgtcagcatctgtgaggaagaatgctgtgctggtcatttct
catcttatattgaatgatatgatgaaggttaaaggatatatcaatgaaatggctgtgagg
gtagaagatgaagacgagaggatctcaagccttgcaaaactcttctttcatgagctatca
aagaaaggaagcaatccaatttataatcttcttccggatattctgagcagactgtgcaat
cagcacctcaaggaagaaacatttcgcagcatcatgcaatttttaattggttctattaaa
aaggataaacaaatggaagctcttgttgataagctctgcaataggtttgctggtggaaat
gatgttaggcagtgggagtacatctcttactgcctctctcagctaacctacaccgagaaa
ggcttgaaaaaactcattgataatttcaagatgtttgagcatgcattatccgaagattct
gtgatgaaccacttcagaagcgtgatagcaaagtgtaagaagtttgcaaaaccagagctt
aaagtttgcattgaagaattcgaggagaaagttagcaaggttcacgaggaaaagaaagaa
caggaggccacgaccagaaatgctgaggcacataaacagaaaatgggttctatcgataga
atcctagttactaaagacgttgggcagaatgatagaaagtctgctgaagaggaagctagt
ggtgaggttatcgatccatcagtggataacattgctgaagataaggaaacagaggaagct
agtgaggctgttgatccttcagtggatggtagcaatgctgaagacaaggagataggggaa
agtagcgaggttgctgatccttcagtggttgatagaaatgctgaagataaggagacagag
gaaggcagcgaggttactggtccttcagtggatgatagcaataccgaagatcaggagaca
ggggaatctaccgaggttactggtccttccgtgaatgatggaaatgccgaagacgaggag
acagaggaagctgccgatccttcagcggatgatggaaatgctgaagacaaggagaacatg
cgagaacgcagcgataacattagttcggagaaaagccagccgtcatccacatgcacagaa
ctagaagacggcagcgcagaggttcaatccgcacgaaaaccccgcagaggttcgtcccga
tcaacgctaaagaagatcagggaacctgccttggaaggcccagcagacagcgctgctcca
gtagtcaggcgttcgacccgctcaagcagaaggctctga
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