Lolium rigidum (rigid ryegrass): 124675594
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Entry
124675594 CDS
T09103
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124675594
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lrd01002
]
124675594
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124675594
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124675594
Peptidases and inhibitors [BR:
lrd01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124675594
Ubiquitin system [BR:
lrd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124675594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
124675594
NCBI-ProteinID:
XP_047067621
LinkDB
All DBs
Position
7:complement(279762492..279775181)
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AA seq
1119 aa
AA seq
DB search
MTMMTPPPLEQQQEDEEMLVPHQELPAADAAQPMEVVAQTEPANTAESQPPEDPQTSRFT
WTIENFTRLNGKKHYSDVFVVGGFKWRVLIFPKGNNVENLSMYLDVADSGNLPYGWSRYA
HFSLAIVNQIHQKFTTRKDTQHQFNARESDWGFTSFMPLSELYDPSRGYIVNDTVVVEAE
VAVRKMVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMP
SGSIPLALQSLFYKLQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMK
GTVVEGTIEQLFEGHHINYIECINVDYKSNRKESFYDLQLDVKGCRDVYASFDKYVEVER
LEGDNKYQAEQHGLQDAKKGVLFLDFPPVLQLQLKRFEYDYMRDTMVKINDRYEFPLQLD
LDRDDGKYLTPDADRSIRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTK
EDTKKALEEQYGGEEELPQINPGFNNTPFKFTKYSNAYMLVYIRESDKEKIMCNVDEKDI
AEHLRIRLKKEQEEKEHKKKEKAEAHLYTIIKVARDEDLKEQIGKNIYFDLVDHEKVRSF
RIQKQLPFTSFKEEVAKEYGIPVQSQRFWLWAKRQNHTYRPNRPLAPHEEAQSVGQLREV
SNKAHNAELKLFLEVELGLDLRPIRPPEKSKEDILLFFKFYNPEKEELRFIGRLFVKALG
KPSDILAILNEMAGFSTNEEIELYEEIKFEPNVMCEHIDKKLTFRSSQLEDGDIVCFQKP
SVPDGDTQVRYPDVPSFLEYVHNRQVVHFRCLEKPKEDEFCLELSKLNTYDDVVERVARQ
LGLDDPSKIRLTSHNCYSQQPKPQPIRYRGVEHLLDMLVHYNQTSDILYYEVLDIPLPEL
QCLKTLKVAFHHATKDEVVIHSIRLPKNSTISDVITDLKTKVELSNPDAELRLLEVFYHK
IYKIFPLQEKIENINDQYWTLRAEEIPEEEKNLAPHDRLIHVYHFMKDPNQNQQIQNFGD
PFLLVIHDGETAAEIMDRVQKKLRVPDEEFAKWKLAFISMNRPEYLQDIDVVSARFQRRD
VYGAWEQYLGLEHTDTTPKRSYTANQNRHTYEKPVKIYN
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgacccctccacctctcgagcagcagcaggaggacgaagagatgctcgtg
ccgcaccaggagctccccgccgccgacgccgcgcagccaatggaagtcgtggcccagacg
gagcctgcgaatacggcggagagccagccacccgaggacccgcagacgtcccgcttcacc
tggacgatcgagaacttcaccaggctcaacggcaagaagcactactcggatgtgtttgtc
gttggtggatttaaatggcgtgtgctcattttccccaagggaaataatgtcgagaacctt
tccatgtacttggatgttgccgactcggggaacctcccctatgggtggagtcgctacgct
cacttcagcttggccattgtaaaccagatccatcagaagttcaccacacggaaagatact
caacatcagtttaatgcacgcgagagtgactggggctttacatcgtttatgcctttgagt
gagctgtatgacccaagtaggggctatattgtgaatgatactgttgttgttgaggctgag
gttgctgttcgcaaaatggttgactattggacatacgactcaaaaaaggaaacaggttat
gttggtctcaagaatcagggtgctacctgttatatgaactctcttctgcaaactctgtac
catataccgtacttccggaaggctgtatatcacatgccaactactgagaatgacatgcca
tctgggagtattcctttagccctgcagagccttttttacaagctccagtatagtgacaac
agcgtagctacgaaagagttgactaaatcttttggatgggacacttatgattctttcatg
caacatgatgtgcaggagctcaacagagttctctgcgagaaacttgaagacaagatgaag
ggaactgttgtggaaggaacaattgaacaactatttgaaggccaccacattaattacatc
gagtgcattaatgttgactataaatctaacagaaaagagtccttttatgatctacaactt
gatgtcaaaggttgtcgtgatgtttatgcatcatttgataaatatgtcgaagtggagcgt
ctagagggtgataacaagtatcaggcggaacaacatggcttacaggatgcaaaaaagggt
gttctctttcttgatttccctcctgttttgcaacttcaactgaagcgttttgaatatgat
tacatgcgggatacaatggttaagattaatgaccgttatgagttcccgctacaacttgat
cttgatagggatgatggaaaatatcttactccagatgctgatagaagtatcagaaacctg
tacactcttcacagtgttcttgttcatagtggaggagtacatggcggtcactactatgct
ttcatacgacctacactctcagaccagtggtataaatttgatgacgagcgagtaacaaaa
gaagatactaaaaaggcgcttgaagagcagtacgggggtgaagaagagttgcctcaaatt
aaccctggtttcaataataccccatttaagttcacaaagtattcaaatgcctacatgctt
gtatatattcgtgaaagtgacaaggagaaaataatgtgtaatgttgatgagaaggacatt
gctgagcatttgaggataaggttgaagaaagaacaagaagagaaagaacataagaagaag
gaaaaggctgaagctcacctctacaccatcataaaggttgcacgagatgaagatttgaag
gagcagattgggaagaatatatattttgatctggtggaccatgaaaaagtccgtagcttc
cgtatacagaagcagttgccctttacttcattcaaggaggaagttgcaaaggaatatggc
attcctgtacagtctcagcgcttctggttgtgggctaagaggcaaaatcatacataccgg
cccaatcgtccgctagcccctcatgaagaagcgcaatcagtggggcaacttagggaggtc
tcaaacaaggcacacaacgctgagctgaagctatttctagaagtagaactaggattggat
ttgcgcccaattcgtcctcctgagaagagcaaggaagatattttactcttcttcaagttt
tataatcctgaaaaggaagagcttcgttttattggtaggctttttgttaaggctttggga
aagccatctgatatcctggcaatattgaatgaaatggctggattttccacaaatgaagaa
attgagctctatgaggaaattaagttcgagccaaatgtgatgtgtgaacatattgataag
aaacttactttccgttctagtcagcttgaagatggagacatagtctgtttccaaaagcct
tctgtaccagatggtgatactcaagtgcgctatccagatgttccttctttcttggagtat
gttcataataggcaggtcgtgcacttccgctgtctggagaaaccaaaggaggatgagttt
tgtttggaattgtcgaagcttaatacttatgatgatgttgttgagagagttgcacgtcaa
cttggattggacgatccatcaaaaatccggcttacatctcacaattgctattctcaacaa
cctaaaccacagcccatcagatatcgtggagtagagcatctattggatatgcttgtccat
tataatcagacttctgacatactgtattatgaagttctcgacattccactgccagaattg
cagtgtttgaaaacacttaaagttgcatttcaccatgcaacaaaagacgaggttgtgatt
catagcatcagacttccaaaaaatagcaccatcagtgatgtgatcaccgacttgaaaacc
aaggttgaactatccaatcctgacgctgagctccgcttgcttgaagttttctatcacaaa
atttataagatatttccacttcaagaaaagatagagaatataaatgatcagtactggacg
ttacgtgctgaggagattccagaggaggagaagaatctcgctccacatgatcggttgatt
cacgtctatcatttcatgaaagatcctaatcagaaccagcagattcagaatttcggagat
ccttttttgctggtcatccatgatggtgagactgctgcagagataatggaccgtgtgcag
aaaaaactccgggttcctgatgaagagttcgccaagtggaagcttgcattcatatccatg
aatcgtccagaatacctccaggatattgatgttgtatctgcacgttttcagaggagagat
gtgtacggagcttgggaacaataccttggcttggagcacactgacactacaccaaaaagg
tcttacacagccaatcagaaccgacacacgtatgagaagcccgtgaagatttataattga
DBGET
integrated database retrieval system
