KEGG   Lolium rigidum (rigid ryegrass): 124681220
Entry
124681220         CDS       T09103                                 
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03030  DNA replication
lrd03410  Base excision repair
lrd03420  Nucleotide excision repair
lrd03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124681220
   03410 Base excision repair
    124681220
   03420 Nucleotide excision repair
    124681220
   03430 Mismatch repair
    124681220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lrd03032]
    124681220
   03400 DNA repair and recombination proteins [BR:lrd03400]
    124681220
Enzymes [BR:lrd01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     124681220
    6.5.1.6  DNA ligase (ATP or NAD+)
     124681220
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     124681220
DNA replication proteins [BR:lrd03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    124681220
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     124681220
DNA repair and recombination proteins [BR:lrd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     124681220
   NER (nucleotide excision repair)
    Other NER factors
     124681220
   MMR (mismatch excision repair)
    Other MMR factors
     124681220
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase TrmB Presenilin
Other DBs
NCBI-GeneID: 124681220
NCBI-ProteinID: XP_047072114
LinkDB
Position
Unknown
AA seq 847 aa
PPPPLLRPRLYSSAAPRRRSTAAKSVDKKPPARPGRAEAVPPLPAVAAGGGAMSSSGGAG
GKRSVADVLMGNARDAARKAKKGPGAPSPKKTKTAAQADDATAEPPSPAKSPANANDAPG
AKKRSPSPTRSKKPAAAPKSEAEEKPPSPKRSKALAAKSDAKPSDEAPISQSPSPTKASQ
SEDKKRPSSPPKKAKTSTATTKPEEANTTLELKKKGGEFDPTAAAYWKPGEPVPFLFLAR
ALDLISNESGRILITEILSNVFRTIIATTPEDLLATVYLSVSRIAPPHEGIELGIGDTSI
IRALSEAYGRKEEHVKKNLKELGDLGLVAKASRSSQKMMYKPKPLTIPRVLDTFRTIAKE
SGKDSQDKKRNHIKGLLVAATDCEPQYIIRLLQSKMRIGLAEKTVQMALAQAAVYSEKGS
PPKEVQSPFEEAAKIIKHAYSVLPIYDKIVPTLLEAGVWKLPETCNFSIGVPVGPMLAKA
TKSVSEIIDKFQGRDYTCEYKYDGERAQIHCMEDGTVEIYSRNAERNTGKYPDVVDAVSR
FRKPTVKSFVLDCEIVAYDREKKRILPFQILSTRARKGVTINDIKVTVCTFGFDILYING
KPLLHEQLKVRREHLYNSFEEVPGVFQLATAITSNDLEEIQKFLDLSVNSSCEGLIIKTL
DTDATYEPAKRSNNWLKLKKDYMDSVGDSLDLVPIAAFHGRGKRTGVYGSFLLACYDDQN
EEYQTICNIGTGFSEQQLEQCSTSLRSKVINNPKAYYRFADTTNPDVWFEPSEVWEVKAA
DLSISPVHRAANGIVDPNKGISLRFPRLLRVREDKNPEHATTSEQVADMYRAQKINHSHN
QDDEDDD
NT seq 2544 nt   +upstreamnt  +downstreamnt
ccgccgccgccgctcctccgcccccgcctctactcctccgccgcccctcgccgccgctcc
accgccgccaaatccgtcgacaagaagccgcccgcgaggccggggagggcggaggcggtc
ccgccgctgcccgcggtcgccgcggggggaggagccatgtcgtcctcgggaggcgccggg
gggaagcgctccgtggcggatgtgctcatggggaacgcgcgggacgccgccaggaaggcc
aagaaggggcccggggcgccgtcccccaagaagaccaagaccgccgcccaggccgacgac
gcgacggccgagccgccttcgccggccaagtcgcctgccaatgccaacgacgcgcctggg
gcgaagaagaggtccccgtcgcccacgaggtccaagaagccagccgcggccccgaaatct
gaggcggaggagaagcccccttcgccaaagaggtccaaagccctagcggccaaatctgac
gccaagccctctgacgaagcccctatctctcaatcgccgtcgccaaccaaggcgtctcaa
tccgaggataagaagaggccctcctcaccaccaaagaaggccaagacctcaactgccacc
accaagcccgaggaagcgaacaccaccctcgagctcaagaagaaaggcggcgagttcgat
cccacggccgccgcctactggaagcccggcgagcctgtgccgttcctgttcttggcccgg
gcgctcgatctcatctccaacgagtcgggccggattctcatcacagagatcctgtcaaat
gtgttccggacgattattgccacgacgcctgaggatctcctcgcgacggtgtacctctcg
gttagccggattgcgccgcctcatgaagggatcgagcttgggatcggggatacgtcgatc
atccgtgcgctttctgaggcatatggccgcaaggaggagcatgtcaagaagaacctcaag
gaattgggtgatttggggcttgtggccaaagcaagcaggtcgtcacagaagatgatgtac
aagccaaaaccactgacaataccacgcgtgcttgatacatttcggacaatcgcaaaggaa
tctggtaaagatagtcaagataagaaaagaaatcatatcaaaggactccttgttgctgca
acggactgtgaacctcaatacattatacgccttcttcagtcaaagatgcgcattgggttg
gcagaaaaaactgtccaaatggctctcgcgcaagctgctgtatattctgaaaaagggtct
ccaccgaaagaagtccaatcaccttttgaagaggctgcaaaaataattaaacacgcatat
tcagtccttccaatctatgataaaattgtcccaactcttcttgaagctggtgtctggaaa
cttccggaaacatgcaatttctccataggtgtccctgttggccctatgttggcaaaagca
acgaaatcggtctcagagattattgacaagtttcaaggtcgtgactacacttgtgagtac
aagtatgatggtgaacgtgcccagatccattgcatggaggatggaacagtggagatttat
agtcggaatgctgaacggaacactgggaagtaccctgatgttgttgatgccgtttccaga
ttccgaaagcctacagtgaagtcatttgtcttagactgtgaaattgttgcttatgaccgt
gaaaagaagagaattttaccttttcagatacttagcacaagggcccgcaagggtgttact
ataaatgacatcaaagttacagtctgtacttttggctttgatattctttacatcaacggg
aaacctcttctccatgaacaactcaaagttcgccgagagcacctttacaactctttcgag
gaagtaccaggagtttttcaactggccactgctattacatcaaatgacctcgaggagata
caaaaatttcttgacttatctgtgaactccagttgtgaagggttgattatcaagacactg
gatacagatgctacatatgaaccagcgaagcggtcaaacaattggttgaaattgaagaaa
gactacatggatagcgttggagactctttagatttggttccaattgctgcctttcatgga
agaggaaaacgaacaggtgtatatggatcattcctcctggcatgctatgacgatcagaat
gaagaataccaaacaatctgcaatataggtactgggttttctgagcaacaactggaacaa
tgttctacgagcctccggagtaaagtaataaataaccccaaggcatactataggtttgct
gacacaactaacccagatgtgtggtttgagccatcagaggtgtgggaggtcaaagctgct
gatttgagcataagtcctgttcatcgtgctgctaatggtatagttgacccaaataagggc
atctctctaaggtttcctcgtttgttgcgggtgcgtgaggataaaaacccagaacatgca
accacgtctgagcaagttgcggatatgtatcgtgctcaaaaaataaaccactcacacaac
caagacgacgaggatgatgactga

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