Lolium rigidum (rigid ryegrass): 124683216
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Entry
124683216 CDS
T09103
Name
(RefSeq) RNA-binding protein 25-like isoform X1
KO
K12822
RNA-binding protein 25
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124683216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124683216
Spliceosome [BR:
lrd03041
]
Complex A
U1 snRNP components
U1 related factors
124683216
Complex B
124683216
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
124683216
NCBI-ProteinID:
XP_047073734
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Position
1:152044951..152050419
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AA seq
902 aa
AA seq
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MAAVAPPPDNLDPPPSTPPNTATPPPATATATATPPNPTTPNPLTPNPTMPSPNPNPLPG
PPLIMPPMPPAPVSFTPSFRPMPGPPPPQMQQYGAVRNPGYPMQPPGVHHVMRPPTMYAP
QPGPYMQQPGAPVPPGMQRYPGPYTMMRPVFPPRPMPPVGVMPIQRPPLMPGIRGAPPMV
APPVRPPAPAVTPLDKPPTAVYVGKIAPTVDNDFILSLLRICGPVKSWKRTQNPSNGKPV
AFGFCEFESAEGILRATRLLNKLSIDGQELVVNINDATKEYLKKHVEGKKKAQENAKEKE
DGGGDGTSAAAENESLKLDSDKTDETEDVGDKDDQENTKKFGIVTNEDSEADKEAAEQIN
SMIEEWLKTRPPPPPPPPPPVQPLAEISSKHNNGESGVDMTNTDSEDKNNDDMDKRTSNE
TEKAETGSPDRRKDREHDKDKREKDIQRYERERERERVRRDRDKEHKHKEVERLYKDHVK
EWESREKEKEYQRQYEKDREKEKERERRREIMKQEEDSDEEDSRKRRRKGSSTFEERKRR
RQREKQEDLADKLKEEEEIAEARRRAIELQQQADEAAAAAAAAAAESATLMEVDGDDEKE
SNVQNKPINSDDDNITGFANGGYADDGTHKDNNGDEASTIQGQILDINQNSNAPAKKLGF
GLIGSGKRTSVPSVFAEDDDEDNKDKKIRPLVPIDYSTEELQAVETDSSAGQQNIVAAAE
FAKRILVSNQKEEKLESEKDRSRRSTDRLSQRDKSRNEEDGARISDERREKMQDRDKDRQ
DKPKSENKKIVDAKQLIDMIPRTKEELFSYDINWSIYEKHELHDRMRPWISKKIVEFLGE
EESTLVEYIVSCTKDHVHASKMLELLQSILDVEAEMFVLKMWRMLIFEIKKVEAGLSGRG
KA
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtggcgccgcccccggacaacctagacccgccgccgtcaactcctcccaac
acagcaactccgcctccggccaccgccaccgccaccgccaccccgcccaaccccacaacc
cctaaccccttgacccccaaccccaccatgccaagccctaaccctaaccccctcccgggc
cctccgctcatcatgccgccgatgccccccgcgccggtgtccttcaccccgtccttccgc
ccgatgcccggacctcccccgccgcagatgcagcagtacggcgccgtgcgcaatccgggc
tacccgatgcagccgccaggcgtgcaccacgtgatgcgcccgcccaccatgtacgctccc
cagccggggccctacatgcagcagcccggcgcccccgttcctcccggtatgcaacgctat
cctggaccatacactatgatgcgtccagtctttcctccacgccccatgcctccagttggt
gttatgccaattcaacggccaccccttatgcctgggatccgtggtgctcctcctatggta
gcccctcctgtcagaccgcctgctccagctgttacacctcttgacaaaccaccaactgca
gtttatgttgggaagattgccccaacagtggacaatgatttcattctttcacttcttcgg
atttgtggacctgtcaagagttggaagcggacccaaaatccaagtaatgggaaacccgta
gcatttggcttttgtgagtttgagtctgctgaaggcatacttcgtgctactcggttgctc
aacaaattgagcattgatggacaagaactcgtggttaatattaatgatgccaccaaagag
tacctgaaaaaacatgttgaaggaaaaaagaaggcacaggagaatgccaaagaaaaggaa
gatggaggcggggatggaacttctgctgctgctgaaaatgaatcattgaagcttgattct
gataaaacagatgaaacagaagatgttggagataaggatgatcaagaaaatactaagaaa
tttgggattgttacaaatgaagattctgaggcggataaggaggctgcagaacaaataaat
agtatgattgaagagtggttaaagactcgaccgccgccgccgccaccaccaccgccgcca
gttcaaccacttgctgaaatctcatccaaacataataatggagagtctggtgtagacatg
acaaacactgattctgaagacaagaataatgatgacatggacaaaaggacatctaatgaa
actgaaaaagcagaaactggctcgcctgataggaggaaggatagagaacatgataaggac
aagcgagaaaaagatattcaaagatatgagcgtgagcgtgagcgagaaagagtcaggaga
gatagagacaaggaacacaagcataaagaagtggaaaggctgtacaaagatcatgttaag
gagtgggaatccagggaaaaagagaaggaatatcaaaggcaatatgagaaggaccgcgag
aaggaaaaagaacgtgaacgtagaagggagatcatgaagcaggaagaggatagtgacgaa
gaggattcaaggaaaagaagacgcaagggtagtagcacatttgaagagaggaaaaggagg
aggcaacgtgaaaaacaagaagacttggcagacaaattgaaagaggaagaggaaattgct
gaggcaaggaggcgtgctatagagctgcaacagcaagcagatgaagcagctgcggcggct
gcggcagccgcagcagagtctgctacacttatggaggttgatggtgatgatgaaaaggaa
agtaatgtgcaaaacaagccgattaattcagatgatgataacattaccggctttgcaaat
ggtggttatgcagatgatggcactcacaaggacaataatggtgatgaagcaagtacgata
caaggtcaaattctagatatcaatcaaaatagcaatgcaccagcaaagaagctgggtttt
ggtttgattggctctggaaaacgaacatctgttccatcagtttttgctgaggatgatgat
gaggataataaggataaaaagataagacctttagtacctatcgattactccactgaggaa
ttacaagctgtggagacagattcttctgctggccaacagaatattgtagcagctgctgag
tttgccaagcgcatcttggtatctaatcagaaggaagagaagcttgaaagtgagaaggat
aggagcaggagatccactgataggttgagccaaagggataaaagtcgaaatgaggaagat
ggtgctcgcatcagtgatgagagaagagaaaagatgcaggatcgagacaaagataggcaa
gataagcccaagtcagagaacaagaaaattgtggatgcaaaacaactgattgatatgatt
ccgaggacaaaggaagagcttttttcctatgatattaattggtcaatatatgagaagcat
gagttgcatgatagaatgaggccttggatctcaaaaaagatagttgaatttcttggtgag
gaggaatcaactttggtggaatatatagtctcgtgcaccaaagatcatgtgcatgcgtcg
aaaatgctggagctcctacagtcaattttggatgttgaggctgaaatgtttgtccttaag
atgtggaggatgctaatatttgaaatcaagaaagttgaagcaggactatcaggaagaggg
aaggcttga
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