Lolium rigidum (rigid ryegrass): 124683928
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Entry
124683928 CDS
T09103
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00040
Pentose and glucuronate interconversions
lrd01100
Metabolic pathways
Module
lrd_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124683928
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
124683928
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GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
124683928
NCBI-ProteinID:
XP_047074300
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Position
1:292261674..292263112
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AA seq
418 aa
AA seq
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MAIRNVAIRVFFLLLVVSAAFAKDKEEKKDEKKDEKTEGAASEADGTYDITKLGAKDDGK
TDCTKEVEEAWASACGGTGKQTIVIPKGDFLTGPLNFTGPCKGDSVTIKLEGNLLASNDL
AKYKSNWIEIMRVKNLAITGKGTLDGQGKAVWTKNSCAKSYDCKILPNSLVLDFCDDALI
EGITILNSKFFHLNIYECKGVTVKDVIVSAPGDSPNTDGIHMGDSSKVTIMDTKIGVGDD
CISIGPGSKEVNISGVTCGPGHGISVGSLGRYKDEKDVTDVTVKNCVLKGSTNGLRIKSY
EDAKSPVVASNFHYENVQMDDVGYPIIIDQKYCPNKICTSKGDSARVTVKDVTFTNITGT
SSTPEAVSLLCSDKKPCEGVTMNDVKIEYTGKNNKTMAVCTNAKVTAKGVDKANSCDA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcaggaatgtcgcgatcagagtcttcttcctcttgttggtggtgagcgcggcg
ttcgccaaagacaaggaggagaagaaggatgagaagaaggatgagaagacggagggcgca
gcgtccgaggctgacgggacctacgacatcaccaagctcggcgccaaagacgatggcaag
acagactgcaccaaggaggtggaggaggcatgggcttcggcatgcggtggcaccgggaaa
cagacgatcgtcatcccaaagggggatttcctgactggccctctgaatttcaccggacca
tgtaagggggacagcgtgacaatcaagctagagggcaaccttctggcctccaacgacctg
gccaagtacaagtctaactggatcgagatcatgcgcgtcaagaacctcgccatcactggc
aaaggcacgctcgacggccagggcaaggccgtctggaccaagaacagctgcgccaagagc
tacgactgcaagatcctgcccaactcattggtgctggacttctgcgacgacgcgctcatc
gaaggcatcaccatcctcaactccaagttcttccacctcaacatctacgagtgcaagggc
gtgactgtcaaggacgtgatcgtcagcgcgcctggggacagccccaacaccgacggcatc
cacatgggcgactcctccaaggtcacaatcatggacaccaagatcggcgtcggcgacgac
tgcatctccatcggccccggcagcaaggaggtcaacatcagcggcgtcacctgcggtcca
ggccacggcatcagcgtgggcagcctcggacggtacaaggacgagaaggacgtgacagac
gtcaccgtcaagaactgcgtgctcaagggctccaccaacggcctccggatcaagtcgtac
gaagacgccaagtcgccggtcgtagcgtccaacttccactacgagaacgttcagatggac
gacgtcggctaccccatcatcatcgaccagaagtactgccccaacaagatatgcacctcc
aagggagactccgccagggtcaccgtcaaggacgtcacattcaccaacatcaccggcacc
tcctccacccccgaggccgtcagcctgctttgctccgacaagaaaccgtgtgaaggtgtc
accatgaacgacgtcaagattgagtacaccggcaagaacaacaagaccatggctgtttgc
accaacgccaaggtcaccgctaagggtgtcgacaaggctaacagctgtgacgcgtga
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