KEGG   Lolium rigidum (rigid ryegrass): 124691524
Entry
124691524         CDS       T09103                                 
Name
(RefSeq) SKP1-like protein 1
  KO
K03094  S-phase kinase-associated protein 1
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03083  Polycomb repressive complex
lrd04120  Ubiquitin mediated proteolysis
lrd04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    124691524
   04120 Ubiquitin mediated proteolysis
    124691524
  09126 Chromosome
   03083 Polycomb repressive complex
    124691524
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lrd04131]
    124691524
   04121 Ubiquitin system [BR:lrd04121]
    124691524
   03036 Chromosome and associated proteins [BR:lrd03036]
    124691524
Membrane trafficking [BR:lrd04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    124691524
Ubiquitin system [BR:lrd04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Adaptor protein
     124691524
   Cul7 complex
     124691524
Chromosome and associated proteins [BR:lrd03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     124691524
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     124691524
SSDB
Motif
Pfam: Skp1 Skp1_POZ BTB
Other DBs
NCBI-GeneID: 124691524
NCBI-ProteinID: XP_047080764
LinkDB
Position
2:complement(32764670..32768508)
AA seq 176 aa
MAAAEGEKKMITLKSSDGEEFEVEEAVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKV
IEYCNKHVQAAKPAGADGAASAPGAGVDGAAAPAPAEDLKNWDAEFVKVDQATLFDLILA
ANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE
NT seq 531 nt   +upstreamnt  +downstreamnt
atggctgccgcggagggcgagaaaaagatgatcacgctcaagtcctcggacggcgaggag
ttcgaggtcgaggaggccgtcgccatggagtcgcagacgatccggcacatgatcgaggac
gactgcgccgacaacggcatccctctccccaacgtcaactccaagatcctctccaaggtc
atcgagtactgcaacaagcacgtccaggccgccaagcccgccggcgccgacggggcggca
tcggcgccgggggcgggggtggacggggccgcggctccggcgcccgccgaggacctcaag
aactgggacgccgagttcgtcaaggtcgaccaggccaccctcttcgacctcatcctggct
gcaaactacctgaacatcaagggcttgctggatcttacgtgtcagactgtggccgacatg
atcaagggcaagacgcctgaggagatccgcaagacattcaacatcaagaacgacttcacc
cccgaggaggaggaagagattcgcagggagaaccagtgggcgttcgagtag

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