Lolium rigidum (rigid ryegrass): 124701322
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Entry
124701322 CDS
T09103
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like
KO
K04523
ubiquilin
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124701322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124701322
03051 Proteasome [BR:
lrd03051
]
124701322
Membrane trafficking [BR:
lrd04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
124701322
Proteasome [BR:
lrd03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
124701322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
RPN13_C
Dsc3_N
Rad60-SLD_2
TSC22
PNPase_C
Motif
Other DBs
NCBI-GeneID:
124701322
NCBI-ProteinID:
XP_047089327
LinkDB
All DBs
Position
3:complement(26107996..26112346)
Genome browser
AA seq
531 aa
AA seq
DB search
MGGGGEGSGEGGEPAAGAAAAAPATLHIRGSSGNKFAVQADLGATVGAFKAVVAEGCDVP
APQQRLIYKGRILKDDQTLASYGVETDHTIHMVRGAAPPATPAAPAAANHGTSTTANAPP
AGFGALFQGLGTTGNAGSGGLGLAGSGLPGLEQMQQQLTQDPNLMRDILNMPAMQNLINS
PDLIRDLIMNNPQMRELVDRNPDLAHVLNDPSILRQTVEAARNPELMREMMRNTDRAMSN
IESSPEGFNMLRRMYETVQEPFLNATTMAGEGDRNANPFAALLGNQGTNQARDPAGDAST
TAPVPNTNPLPNPWSANAGAAQGAARPAPAARSATSGGLGGLGSTDLGNMLGGGSDASFL
NQVLQNPTMMQMMQNIMSNPQSMNQLLNMNPNVRNMMESNTQMREMFQNPEFLRQLTSPE
TLQQLISFQQALTSQLGQQQAGQERTQAGTNPGNVNLNSLMSMFNGLGAGGHLGALDHVT
AALPPEERFATQLAQLQEMGFFDTQENIRALMATYGDVTAAVERLLQNFGQ
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgggggtgagggctcgggcgagggcggcgagcccgccgcgggggcggccgcg
gccgcgccggcgacgctgcacatccggggctccagcgggaacaagttcgccgtgcaggcc
gacctgggcgccaccgtcggcgcgttcaaggcggtcgtcgccgagggctgcgacgtgccc
gcgccgcagcagcgcctgatctacaagggccggatcttgaaggacgaccaaaccctagcc
agctacggtgtggagacagaccacaccatccatatggtgcgtggcgctgcaccaccagca
acaccagctgcaccagctgcagcaaaccatgggacttcaaccactgcgaatgccccacca
gctggttttggagccttgttccaaggtcttggcactacaggaaatgctggaagcggaggt
ttgggtttagctggatccggccttccaggattagagcagatgcaacagcagttaactcag
gatcccaacttgatgagggacatattgaatatgccagccatgcagaatctaattaatagc
cctgatctaatacgtgatttaattatgaacaatcctcaaatgcgtgagcttgttgaccgt
aatccggatctggcacatgtcctgaatgatccaagcattctccgccaaactgttgaagca
gctaggaatcctgaacttatgagggagatgatgcggaacacagacagagccatgagcaac
attgaatcttcccctgaagggtttaatatgctccgtcgcatgtatgaaactgttcaggag
ccattcctgaatgcaacaacaatggctggggagggtgatagaaatgcgaacccatttgct
gcccttctcggaaaccaagggactaaccaagcaagagatccagctggagatgcatcaact
actgcccctgttccaaatactaatcctctcccgaatccctggagtgcaaatgctggggct
gcacaaggagcagcaaggcctgctcccgctgcaaggagtgcaacaagcggtggcctagga
ggattgggttctacagatttgggaaatatgctgggtggtggctctgatgcatccttcttg
aaccaggttttgcaaaaccctaccatgatgcaaatgatgcagaacattatgtccaatcct
cagtccatgaatcagttgctcaacatgaacccaaatgtacgtaacatgatggaatcaaat
acccagatgagggaaatgtttcagaatccagaatttcttcgccagttaacatctcccgaa
acattgcagcaattaatttcattccagcaggcgctgacgtcgcaacttggtcaacaacaa
gctggccaggagcggacccaagcgggcactaatccaggcaacgttaacctcaacagcttg
atgagcatgttcaatgggcttggtgctggcggtcatcttggtgctctcgatcatgttact
gctgccctgccacctgaagagcgcttcgcgacgcaactagctcagctccaagagatgggg
ttcttcgacacccaggagaacatccgagcgctgatggctacctatggggacgtcactgcc
gcagtggagcgactccttcagaatttcgggcaatag
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