Lolium rigidum (rigid ryegrass): 124701451
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Entry
124701451 CDS
T09103
Name
(RefSeq) WD repeat-containing protein 3
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124701451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrd03009
]
124701451
Ribosome biogenesis [BR:
lrd03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124701451
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Utp12
ANAPC4_WD40
NBCH_WD40
Nup160
WD40_like
WDR54
PALB2_WD40
CDtoxinA
PROPPIN
AAR2_1st
Utp13
Motif
Other DBs
NCBI-GeneID:
124701451
NCBI-ProteinID:
XP_047089469
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Position
3:complement(37350890..37365440)
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AA seq
937 aa
AA seq
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MVKAYLRYEPALSFGVIVSPQSNVVYDPSGRRLLAAALDRFAAWDLKRGLPSATFTPSSS
SASLAVSCIASSPSAASASASSIASGHADGSIRLWDAETGACEATLHGHRSAASALRFSP
SGAVLASGSKDCDVILWDVVAQAGLFRLRGHRDQVTDLLFLDSGKKLVTCSKDKFMRVWD
LDTQHCLQIVGGHHSEIWSMDVDPSEKFLVSGSADPELRVFRIRQSAEEGEGWNKWDALK
LFGEIPRQAKERVQTIRFNKDGTLVVCQVAGKTADIYRILDEAEATRKAKRRLHRKKEKA
SAKAVVAEGNGTVKDQDSQNPTVVVSDVFKLLQVLRSSKKICSVAFSPTNPPKGCLATLS
LSLNNNVLETYSVDNDKVSKMYSVEIHGHRSDIRSLALNSEDNLLMSTSHNAVKIWNPST
GDCLRTIDSGYGLCSAFVPGNRYGLVGTKTGTLEIIDINSGNSVDVIEAHVGSIRSIVLI
PDEDGTVNARGFVTGSADNDIKFWEYQLVQKSDSDARHLSVTNVRTLKMNDDVLAVSIGP
TGKHIAVALLDCTVKVFFLDTLKFCLSLYGHKLPVLCMDISSDGAFIVTGSADKNLKIWG
MDFGDCHKSIFAHTDSVMDVKFVPRTHYMFSVGKDRTVKYWDADKFELLLTLEGHHAEVW
CLANSSRGNFIVTGSHDRSIRRWDRTEEQLFIEEEREKRLEETFEADLDNAVEDRYGKKD
DAPEEGSVGVPGKKTKETVSATDAIIDALDTAEEEEKRLNEQKELQNSGEGTKSVPNVIM
QGHSPSEYVLNAVSNVRPNDLEQALLSLPFSDALKLMAYLKEWSLIPLKVELVCRVCHVL
LQTHHNQLTTTPGARSILTELKEILYGRVKDCKDTIGFNLAAMDHIKELLAMRSDAPFRD
AKAKLMEIRQKQSKRSDRSADGDKRRRKKAKTSPAQS
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggcctacctccgctacgagccggcgctctccttcggcgtcatcgtctccccg
cagtccaacgtcgtctacgacccctccggccgccgcctcctcgccgccgcccttgaccgc
ttcgccgcctgggacctcaagcgcggcctcccctccgccaccttcaccccctcttcctcc
tccgcctccctcgccgtctcctgcatcgcctcctccccctccgccgcttccgcctccgct
tcctcgattgcgagtggccatgccgacgggagcatcaggctgtgggacgccgagaccggt
gcctgcgaggcgacgctccacggccaccgctccgctgcttccgctctacgcttcagtccc
tcaggcgccgtccttgcttccggcagcaaggactgcgatgtcattctctgggacgtggtt
gcacaggccggcctcttccgacttcgtggccaccgtgatcaggtgaccgatttactgttc
ctggactcgggtaagaagctagtgacctgctccaaggacaagtttatgcgggtctgggac
ctcgacacgcagcactgccttcaaattgtgggtggccaccacagcgagatatggtccatg
gatgttgaccccagcgagaagtttttggtctctgggtcggccgatccggagctgcgggtg
ttcagaataaggcaatcagctgaggagggtgagggttggaacaaatgggatgcgctgaag
ctgtttggcgagattccgaggcaggccaaagaaagggttcagaccatcaggtttaataag
gatggcactcttgtggtatgccaggtagcagggaaaactgcagatatctataggattctt
gatgaggcagaggcgacgcgcaaggccaagaggcggctgcacaggaagaaggagaaggct
tcagctaaagctgtggtggcggaagggaatggtactgttaaagatcaagactcgcagaat
cccactgttgtggtcagcgatgtatttaagcttctccaagtgctgcggagcagcaagaaa
atttgctctgttgcattttctccaaccaatccaccaaaaggctgccttgcaaccttgtca
ttgtctctcaacaataacgtgcttgagacatactcggtggataacgacaaggtctctaag
atgtactcggttgagatacatgggcatcgttctgacattaggagtcttgcgcttaactca
gaggataacctcctcatgtcaacaagtcacaatgctgttaaaatctggaatcctagtaca
ggggactgtcttcggaccattgactctggatatgggctgtgcagtgcatttgttcctggg
aatcgttatggccttgtcggtacaaagactggtaccttggagatcattgatattaatagt
gggaactcagttgatgtaatagaagctcatgttggttccatacgatcaattgtactcatt
ccagatgaggatggaactgttaatgcacggggttttgtcactgggagtgctgataacgat
atcaagttctgggaataccagttggtacagaaatctgattcggacgcaaggcatctgagt
gtaacaaatgtgagaaccttgaaaatgaatgacgatgtccttgcagtgtccatcggtcca
actgggaagcatattgcggttgctcttttggactgcacagtgaaggtcttctttctggac
acactaaagttttgtctttccctttacggccacaagcttccagttctctgcatggacata
tcatccgatggagcttttattgttactggttctgcagacaaaaatctgaagatttggggt
atggattttggtgactgccataagtctatctttgcccacacagacagtgtgatggatgtt
aagtttgttccaagaactcattatatgttcagcgtgggaaaagatcgtactgtgaagtac
tgggatgctgataaatttgagctactgttaacacttgaaggacaccatgcagaagtttgg
tgccttgcgaatagcagtcgtggtaattttatcgtaacaggctcccatgatcgctctatt
cggcgttgggatcgtactgaagaacaacttttcattgaggaagagagggagaaaagattg
gaggaaacttttgaggctgatttagacaatgcggttgaagatagatatggtaagaaagat
gatgctcctgaggagggttctgtgggtgttcccggtaagaaaacaaaagagacagtatct
gctactgatgcaattattgatgcacttgacactgctgaggaagaagaaaaacgtcttaat
gaacagaaggaattacaaaacagtggagagggaactaaatctgtgcctaacgttataatg
caagggcattcaccatcagaatatgttctgaatgcagtgtcaaatgtccgcccaaatgac
ttggaacaagcccttttgtcattgccattctcggatgcactaaagctcatggcttacttg
aaggagtggtctctgattcctttgaaggttgagcttgtttgtagggtttgccatgtgctg
cttcaaacacatcataaccaattaactactacaccaggggcaagatccatactgacagaa
ctgaaggaaattctttacggtagagtaaaggactgcaaggatactattggtttcaatctc
gccgcgatggatcatataaaagagttgttggccatgagatcagatgcaccgttccgagac
gccaaggcgaagctgatggagatcaggcagaagcagtcaaagcggtcagataggtcggcc
gacggagataaaaggagaaggaagaaagcgaagacgtcacctgcacagagctga
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