Lolium rigidum (rigid ryegrass): 124702298
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Entry
124702298 CDS
T09103
Name
(RefSeq) ABC transporter B family member 20-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124702298
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lrd02000
]
124702298
04147 Exosome [BR:
lrd04147
]
124702298
04090 CD molecules [BR:
lrd04090
]
124702298
Enzymes [BR:
lrd01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
124702298
Transporters [BR:
lrd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
124702298
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124702298
CD molecules [BR:
lrd04090
]
Proteins
124702298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_15
Zeta_toxin
AAA_16
AAA_22
AAA_30
ABC_ATPase
Glyco_hydro_42M
Motif
Other DBs
NCBI-GeneID:
124702298
NCBI-ProteinID:
XP_047090379
LinkDB
All DBs
Position
3:126303194..126311210
Genome browser
AA seq
1408 aa
AA seq
DB search
MVPSGLFGWASPHVQPLTPVSEVSEPPESPSPYGDGPSGDAGVGEGAPGGEDDDAEEDEP
EPPPAAVSFWRLFDFADGLDWALMAAGALAAAAHGAALVVYLHFFGRALNLLDSERVQSA
LHGDSKELLDLFMQHTLYIIYIAGGVFVAGWIEVSCWILTGERQTAVIRSKYVQVLLNQD
MSFFDTYGNNGDIVSQVLSDVLLIQSAISEKVGNYVHNMATFVGGLIVGLINCWQIALLT
LATGPLIVAAGGISNIFLHRLAENIQDAYAEAASIAEQATSYIRTLYAFTNETLAKYSYA
TSLQATLRYGILISLVQGIGLGFTYGLAICSCALQLWVGRHLIARGKADGGQVVVALFSV
ILSGLGLNQAATNFYSFEQGRIAAYRLYEMISRSTASTNLEGTTIPQVQGNIEFRNVYFS
YLSRPEIPILSGFFLSVPARKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKN
LKVEWLRSQIGLVTQEPALLSLSIRENIAYGRIATFDQIEEAAKTAHAHGFISSLEKGYE
TQVGRAGKSLTDEQKIKISIARAVLSSPSILLLDEVTGGLDFEAEKTVQDALDVLMLGRS
TIIIARRLSLIKHADYIAVMEEGHLVEMGTHDELLNLDGLYAELLRCEEATKLPKRMPTK
NSRERKSLQFEDPPVSQSFQESSSPKMAKSPSLQRTHGMLQFWRSDTNRNSHDSPKDQSP
PSEQTIDNGIPLVPTERAPSIKSLDSFEMEMPDLPKVGIHPIQRQSSKNSGPDSPISPLL
TSDPKNERSHSQTFSRPQSERDDTSSEQSEPDELQDHKPPSFWRLAALSVAEWPYALLGT
IGAAIFGSFNPLLAYTIALTVSAYYKIEVSDMHHEVNRWCLFIVGMGVITVLVNWLQHFY
FGIMGEKMTERIRRMMFSAMLRNEAGWFDKEENSADTLSMRLANDATFVRAAFSNRLSIF
IQDTAAVSVALLIGMLLGWKVALVALATLPVLVVSAIAQKLWLAGFSKGIQEMHRKASLV
LEDAVRNIYTVVAFCAGDKIMELYKLHLIKILKQSLVQGLAIGFGFGLSQFLLFACNALL
LWYISTSVEQQRLTIATGLKQYILFSFASFALVEPFGLAPYILKRRKSLTSVFEIIDREP
KIDPDDNTGLKPPNVYGSIEFKNVDFSYPVRPEVLVLSNFNLKVSGGQTVAVVGVSGSGK
STIISLIERFYDPVSGQVLLDGRDLKAFNLRWLRSHMGLIQQEPVIFSTTIRENIIYARH
NATEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQRQRIAIARVVLKNAPILL
LDEASSAIESESSRVVQEALDTLVMGNKTTILIAHRAAMMKHVDNIVVLNGGRIVEQGAH
DSLMDLNGLYVRLMQPHFGKGLRQHRLM
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccagcggcctcttcgggtgggcgtcgccgcacgtgcagccactcacaccagtc
tcggaggtctcggagccgccggagtcgccgtcgccgtacggggacgggccgtcgggggac
gcgggcgtgggggagggcgcccccggcggcgaggacgacgacgcggaggaggacgagccc
gagcccccgcccgccgccgtctccttctggcgcctcttcgacttcgcggacgggctcgac
tgggcgctcatggccgccggcgcgctcgccgcggccgcgcacggggccgcgctcgtcgtc
tacctccacttcttcgggagggcgctcaacctgctcgactccgagcgggtccagtccgct
ctccacggggatagcaaggagctcctcgacctgtttatgcagcatactctgtatatcatc
tacatagctggtggtgtttttgttgcaggatggatagaggtgtcatgctggattctcact
ggggaacgacagactgctgtcataagatcaaaatatgtccaggtcttgctaaatcaagac
atgagcttctttgatacatatggaaacaatggtgatatagttagtcaagttctgagcgac
gtgttgctcattcagtcagctattagtgagaaagttggcaactacgtacacaatatggcc
acatttgttggcggtctcattgttggcctgatcaactgttggcaaatagcacttctaact
cttgccactggacccttgattgttgctgctggaggaatatctaatatatttctccacaga
ctggctgaaaacattcaagatgcatatgccgaagcggctagtattgctgaacaggccacc
tcatacatcaggacgctctatgcttttacaaatgaaactcttgcaaagtactcctatgct
acctcacttcaagcgaccctgcgatatggaattttgattagccttgtccaaggaattggc
ctgggatttacatatggattggcaatttgttcatgtgctttgcaactctgggttggaaga
cacctgattgctcgtgggaaagctgacggtggtcaagttgtggtagctttattctccgta
attctgagtggccttggtctgaaccaggcagctacaaacttctattcatttgaacaaggg
cggattgctgcttatagactatatgagatgataagccgttcaactgcaagcaccaatctt
gaagggaccaccataccccaagtgcaggggaacatcgaattcagaaatgtgtacttcagt
tatctctcgcgtcctgaaattccaattttaagtggtttctttctcagcgtaccagctaga
aaaactgttgcacttgttggtagaaatggctcagggaaaagcagcataattcctctaatg
gagagattctacgatccaacgttaggggaagtccttctggatggggaaaatattaagaat
ttgaaagtagaatggttaagaagccaaattggtctggttacacaagaacctgcactactg
agtctgagcattcgcgaaaacattgcttatggaagaattgctacttttgatcaaatagaa
gaggcagccaagacagcgcatgcccatgggttcatcagttcacttgaaaagggatatgaa
acacaggttggtcgagctggtaagtcactgactgatgaacagaagatcaaaatctctata
gctcgtgctgtgctttcgagtccatcaattctcttgcttgatgaagtcacaggaggactt
gattttgaagctgaaaagactgtgcaagatgccttagatgtccttatgttgggaagatcg
acgattataatagctaggcgtcttagcctcattaaacatgctgattacatagctgtaatg
gaggagggacatcttgttgaaatggggacacatgatgaattgctaaacttggatggcctt
tatgctgagcttttaagatgtgaggaagcaacaaaacttcctaagaggatgccgaccaag
aatagtagggagcgcaaatcgctccaatttgaggatccaccagttagccaaagctttcaa
gaatcgtcctctcctaagatggcgaaatcaccttctcttcaaagaacacatggcatgctt
cagttttggcgatcagacaccaacagaaactcccatgattcaccaaaagatcaaagccca
ccttcagaacaaactatagataatggaatacctttggttccaactgaaagagcaccatcc
attaagagtctggacagttttgaaatggaaatgccagatcttccaaaagttggcatccat
cctatacaacggcaatcttcgaagaattcaggacccgattcacctatatctcctcttttg
acttctgatccaaagaacgagcgttcccattcacaaacttttagtagaccacagagtgaa
cgggatgatacaagttctgaacagagtgaaccagatgaattgcaagatcacaagccacca
tcattttggagacttgcagcacttagtgttgctgaatggccttatgctctcttaggcaca
attggtgctgctatatttggctcatttaatccactgctcgcttacacaatagcactcaca
gtgtcagcatattataaaatagaagttagtgacatgcaccatgaagtgaacaggtggtgt
ttattcatagtaggcatgggtgtcattacagtgctggtcaactggttgcagcatttttat
tttggaataatgggggagaagatgactgaacgtataagaagaatgatgttctctgcaatg
ctgcgcaatgaagctggatggtttgacaaagaggagaacagtgctgatacactgtccatg
cgcctggcaaatgatgcaacatttgtccgtgctgcatttagtaaccgtctttccatattc
atacaagacactgccgcggtttctgtagctcttcttattggaatgctcttgggatggaag
gtggcgcttgttgcacttgcaactttacctgttcttgttgtctctgccattgcacagaaa
ttatggcttgccggcttctcaaaaggaatccaggagatgcatagaaaggcttcattagta
cttgaagatgcagtccgcaatatttacaccgttgtagcattttgtgctggagacaagata
atggaactctacaaattacatcttattaagatactgaagcaaagtcttgtgcaaggattg
gccataggcttcggttttggcctctcgcagtttcttctttttgcctgcaacgcccttctt
ctgtggtacatttccacctcagtggaacaacaacgcctgacaatagccacaggactgaaa
cagtacattctattctcgtttgcatcctttgcattggtggagccctttggactcgccccc
tacatacttaaacggcggaagtctctcacttcagtgtttgaaattattgaccgagagcca
aagattgatcctgatgacaacactggtctgaaaccgcccaatgtctacgggagcattgaa
ttcaagaatgttgatttctcctatccagttcgtccagaagtccttgtgctgagcaatttt
aatcttaaggtgagcggcggacaaacagttgcagtggtaggagtttcaggatctgggaag
agcactatcatttccttaattgagagattttatgacccagtatctggccaagttctgctg
gatggccgagatctgaaagcgttcaacctgagatggctgcgaagccacatgggcctaatt
cagcaagagcctgtcattttctcgacaacaataagggagaacattatctatgcaaggcac
aacgcaaccgaggctgagatgaaggaagctgcaaggatagcaaacgctcaccatttcatc
agtagcttgccacatggctacgacactcacgtgggaatgcgaggggttgatctcactcct
gggcagcggcaacggattgccattgctagggtggttttaaagaatgcgccgatattgctg
ttggatgaggccagctctgcaatcgaatctgaatcaagtagagtggttcaggaagctctt
gacacattggtcatggggaacaagacgacgatcctcatcgcgcacagagcggcgatgatg
aagcatgtggataacattgtcgtcctaaatggtggtaggatagtcgagcagggcgcgcat
gactctctgatggaccttaatggtctgtatgttagactgatgcaaccccattttggcaag
ggcctccgccaacatcggctaatgtag
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integrated database retrieval system
