Lolium rigidum (rigid ryegrass): 124702414
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Entry
124702414 CDS
T09103
Name
(RefSeq) serine/arginine-rich splicing factor SR34A-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124702414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124702414
Spliceosome [BR:
lrd03041
]
Common components
Common spliceosomal components
SR proteins
124702414
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
124702414
NCBI-ProteinID:
XP_047090511
LinkDB
All DBs
Position
3:141765110..141769281
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AA seq
290 aa
AA seq
DB search
MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAED
ACAGRDGYNFDGNRLRVEPAHGGRGSGGPSHDRPSFGGGGGFGGGGGGGRRGVSRHTDYR
VLVSGLPSSASWQDLKDHMRRAGDVCFAEVYREGGGTIGIVDYTNYDDMKYAIKKLDDTE
FKNAFSKGYIRVKEYDGKQARSYSRSRSPSRSRSRSASKSPRGRSASRSRSRSVSSRSRS
ASKGRSPSRSPARSKSPIASPANGAVAASPKKRTPSKSPSRSRSPDAKSE
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggcgttggagcaggacgatctatgttggcaacctccccggcgacatccgggag
agggaggtggaggacctcttctacaagtatggccgtattgttgatattgacttgaaggtt
cctccaaggccgcccggctatgcttttgtggagtttgaagatcctcgtgacgctgaagat
gcttgtgctggacgggatggctacaactttgatggaaaccgtctaagagtggagcctgct
catggcggaagaggtagtggcggcccctctcatgaccgtccaagctttggcggtggtggt
ggttttggaggtggcggcggcggtggacgccgtggtgtgtccaggcacacggattaccgt
gttctggtttctggtctgccttcttctgcgtcctggcaagatttaaaggatcatatgcga
agagctggtgatgtttgtttcgcagaagtctatcgtgaaggcggcggcacaatagggatt
gttgactacacaaactatgatgatatgaaatatgctataaagaaactggatgacactgaa
tttaagaatgccttttctaaaggttatataagggtgaaggaatatgatggcaaacaagcg
cgctcctactcgcgcagccgaagcccaagtcgcagccgcagcaggagtgcaagcaaatct
cccaggggccgctcagcatctaggtccagatcaaggtctgtttcttcccgttctcggtcg
gcatctaaaggacgttccccatcaagatcaccagcaagatccaaatccccgatcgcttct
ccggcaaatggtgccgtggcggcaagtcccaagaaacgcactccaagcaagagcccatct
cgctcacggtctcctgatgcgaaatctgaatag
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