Lolium rigidum (rigid ryegrass): 124704482
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Entry
124704482 CDS
T09103
Name
(RefSeq) trafficking protein particle complex subunit 8-like
KO
K20305
trafficking protein particle complex subunit 8
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124704482
Membrane trafficking [BR:
lrd04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
124704482
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
Motif
Other DBs
NCBI-GeneID:
124704482
NCBI-ProteinID:
XP_047092695
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Position
3:complement(388535158..388547195)
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AA seq
1267 aa
AA seq
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MDPLRSYLGRLLLEDVTPVVMVLTTPLAEAACRRSGLSFVDMLSPFSLFKKIDVPVRTAS
DQPYRLQMFKIRMVYASDVRNQDLEVADERIKLVVSEANENALPDLLSDPPQLEDVLKKP
EAELCPSWIKRFNRELVRTLSFSEHETFDHPVACLLVVSSKDKEPISKFADLFNTNQLPS
LLNEGIMDPQILKHYLVLHDQQDGPQEIAVNILAEMRSTLGLNDCKLLCINSSTQADGND
ADNSWLPYKAHGLQNHEGACFLNTDDMNQIKDFMQDFASNHIIPYMEQKIRVLNQQVATT
RKGFRNQIKNLWWRKRDDVPEAANGPMYTFTSIESQIRVLSDYAFMLRDYELALSNYRLL
STDYKLDKAWKRFAGVQEMSGLCYFMLDQSRKDAEYCMENAFTTYLRIGSSGQRNATRCG
LWWAEMLKTRGQHREASAVYFRISNEEPSLHSAVLLEQAACCYLLSSPRMLRKYGFHLIL
AGNSYYLSDQKQHAVRVYRNAMFVYKQNPWSYINNHVHFNVGRWYGVLGIFDVAIKHLME
VIACSHQSLTTQSMFLNDFFHFVQSTGEKFDVYKLQLPVFNMSSLRVVYEDHRTYASNSD
VDVNESIWHELEEEMIPSSSVVRTNWLDTQPKSSPFRNNKACVCVVGEAVKLNVELKNPL
QISVNVSGISLICQLSTDSSSAVLTTAAEEDIANTKPSISTFESDENKFTVSKLDFVLGG
GETRRIQLEVTPKVVGILKLVGIRWTLSDSVVGYQYFEVATQKKNKKGKRGARRSLNNNL
IVIKGLPKLTGNIDCLPTKAFTGDLQLLKLNLSNKSEHAVKNVKMKISHPRFLIPGDSRD
LDLEFPQCLTKHVQSDNNVVLSEGTKGKFKGLLFAFPQDTKIQGGSTFSWPIWFHAATPG
NFSLYLSLYYEMETTTDIPYRTLRMHYNVEVLPSLDVSFAISMCSSRMQEYIVRMDIMNR
TPSKSFALHQLSCVGTKWAVSALPSCSSISSLEKIHANQAVSCFFKIKDVGTNSSIEVAD
KSCGSDIILTSGGSTDVYDVSLSPMTDFHYQERYQQGKLAKGPHSLLDFILISKAAADNS
SKSEQLLSHHTCHCSPLSQNPVWWLMEGPQTITHDFSKSCCEANIQLVIHNSSEDNISVR
VVTSDRMPDKNQTVPSHESASGWYDVSLENDIKAISSAKGTHLQKESSESISPFVWCSLS
SAQVDLKPDSCAKVPLKVCIFAPGTYNFSNYELHWKVHPSEGGQVDENGISGGGQGHPFY
VTVLQGV
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggatccgctccggagctacctggggcggctcctcctcgaggacgtcaccccggtggtg
atggtgctgaccaccccgctcgccgaggccgcgtgccgcaggagcgggctcagcttcgtc
gacatgctctccccgttctccctcttcaagaaaatcgacgtgcccgtgcgcacggcgagt
gaccagccttacaggctgcagatgttcaagattcggatggtgtacgcctcggacgtacgg
aatcaggaccttgaggttgcggatgagagaattaagctggttgtttccgaggccaatgag
aacgctcttccggacttgctttcagacccgccacagctggaagatgtgctaaaaaagcct
gaagctgagttgtgcccttcatggattaaaaggttcaacagagagctagtgcggacactc
tcgttttcagaacatgaaacctttgaccaccctgtggcatgtcttttagttgtatcgtcg
aaggacaaagagccaatcagcaaatttgctgatctctttaacacgaatcagttaccttct
cttttaaatgaaggcataatggatccccagattctgaagcactatcttgtacttcacgac
caacaagatggaccgcaagagatagccgtgaacatcttagcagaaatgaggagcaccctt
ggtttgaatgattgtaagttgctgtgtattaactcttctacacaagctgatggtaatgat
gctgataattcgtggttaccctataaagcgcatggcttacagaatcatgaaggagcttgt
ttccttaacacggatgatatgaatcagataaaagatttcatgcaagattttgcttctaat
catatcatcccctacatggagcaaaagattcgtgtactcaatcagcaggtagccacaaca
agaaagggctttagaaatcagataaagaacttgtggtggagaaagagggatgatgtgcca
gaagctgcaaatggcccaatgtatacgttcacctccatagagtctcagatcagagttctc
agtgactatgctttcatgttacgggactacgagcttgctttgtccaattacagattactt
tcgaccgattataagcttgataaagcttggaagcgctttgctggtgttcaggagatgagt
gggctttgctatttcatgttggatcaatcaaggaaggatgctgaatattgcatggaaaat
gccttcacgacatatctgagaattggatcttctgggcaaagaaatgctactagatgtggc
ctttggtgggcagaaatgcttaaaacaagaggacaacatagggaagcatcagctgtgtat
ttccgcatatcaaatgaggaaccttccttgcattctgctgtactgcttgagcaagctgca
tgttgctatttgttgtcaagtccacgtatgcttcggaagtatggatttcacctaatctta
gctggcaatagttactacttgtctgatcagaaacaacatgctgttagggtttacaggaat
gctatgtttgtttacaaacaaaatccttggagttatatcaacaatcatgtacattttaac
gttgggaggtggtatggagtccttgggatatttgatgtagctatcaagcacttgatggag
gtcattgcctgtagccatcagtcactgacaacacaaagcatgttcctcaatgattttttc
cattttgtccagagtaccggggaaaaatttgacgtatataagcttcaactccctgttttc
aatatgtcatcgctgagagttgtatatgaagatcatcgcacttacgcatccaattcagat
gttgatgttaatgaaagcatttggcatgagctggaggaagaaatgatcccatcatcatca
gttgttagaactaactggctggatactcaaccaaagtcttctccttttagaaataacaag
gcatgcgtttgtgttgttggagaagcagtaaaattgaacgttgagcttaagaatccttta
caaatttcggtgaatgtgtctggcatatctcttatatgccagctttccaccgactcttca
agtgcagtgttgacgacagctgctgaggaagatatagctaacacaaagccctctatttcg
acatttgaaagcgatgaaaacaaatttacagtatcgaagcttgattttgtattaggagga
ggtgaaaccagaagaatacaacttgaagtgactccgaaagttgtaggcattctgaagtta
gttgggataaggtggacactatcagattcagtagtaggctatcagtacttcgaagtggcc
acacaaaagaaaaataagaaaggaaagagaggcgctcgtcgttctttaaacaacaacctg
atcgtaatcaagggtttgcctaaacttacaggaaatattgattgcttgccaacaaaagca
ttcacgggtgatttacagctcctcaagctgaatctgagtaacaaatcagaacatgctgtg
aagaatgtgaaaatgaaaattagccatccaaggtttttaattcctggcgattcacgggat
cttgaccttgagttcccacagtgcttaacaaagcatgtgcaatcagacaacaatgttgta
ttatctgaaggtaccaagggaaaattcaagggcttgctatttgcatttcctcaggatacc
aaaattcaaggtggttccacattctcttggcctatttggtttcatgctgctactcctgga
aacttctcgctttatttgtctctctattatgaaatggagactaccactgacattccatat
cgcacattgcgcatgcattacaatgtggaggttttgccatcacttgatgtatcctttgct
ataagtatgtgctcatcaagaatgcaagagtatattgtgcgcatggatatcatgaacaga
actccatcaaaatcatttgcactccatcagttgtcatgtgtcggcactaaatgggcagtt
tctgcattgccctcgtgcagttccatcagctctttggaaaaaatacatgcaaaccaggct
gtatcatgcttcttcaagataaaggatgtaggaacaaattcatctattgaggttgcagac
aagtcctgcggaagtgatattattttaacttctgggggtagtactgatgtatatgatgtt
tctctgtctcctatgaccgatttccactatcaagaaagataccaacaggggaagttagct
aaggggccacacagtctacttgattttatcctgatctcaaaggcagcagctgataattcg
tccaagtcagaacaactgctctctcatcatacatgccactgcagtcctctcagccagaat
cctgtttggtggcttatggaagggcctcaaaccattactcatgatttctccaagtcttgc
tgcgaggctaacatccaattggtgattcataattcttcagaagataacatttctgtgaga
gtggttacgtccgatcgtatgccagataaaaaccaaactgtcccttcacatgaatctgcc
agtggatggtatgatgtgtcgttggaaaatgacataaaggccatctcaagcgccaagggg
acacacttgcagaaggaatcgtcagaaagcatttcaccgtttgtttggtgttcattgagt
tctgctcaagttgatctcaaacctgacagttgtgccaaagttcctctaaaagtgtgtata
tttgcacctggaacctacaacttttcaaattatgagctgcactggaaggtacatccatct
gaggggggacaagtggatgaaaatgggatatcaggcggtggtcaaggccatcctttctat
gttactgttcttcaaggcgtctga
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