Limosilactobacillus reuteri subsp. reuteri JCM 1112: LAR_0220
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Entry
LAR_0220 CDS
T00735
Name
(GenBank) DNA-directed RNA polymerase delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lrf
Limosilactobacillus reuteri subsp. reuteri JCM 1112
Pathway
lrf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lrf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LAR_0220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrf03021
]
LAR_0220
03400 DNA repair and recombination proteins [BR:
lrf03400
]
LAR_0220
Transcription machinery [BR:
lrf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LAR_0220
DNA repair and recombination proteins [BR:
lrf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LAR_0220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Bac_luciferase
Motif
Other DBs
NCBI-ProteinID:
BAG24736
UniProt:
B2G5K4
LinkDB
All DBs
Position
263531..264088
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AA seq
185 aa
AA seq
DB search
MDLKVFDGQDKSELSMIEVAHAILAHHGKAMAFVDLTNEVQQYLGKSDEEIRERLAQFYT
DLNVDGSFISLGDNTWGLRAWYPFESIDEATVGENEEDEEDDRPKKKRRKVNAFLADTDD
DDDVIDYDNDDPEDEDLDTDDDADSEDDYDDDTDDFSDDDDDLDDGIEGQLSELHDEEDE
DEDDE
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
ttggatttaaaggtttttgacggtcaggacaaatcagaactttcaatgattgaagtcgca
cacgctattttagctcaccatggaaaagcaatggcgtttgttgatttgaccaacgaggtt
cagcaatatctgggtaagagcgatgaggaaattcgtgaacgtcttgcacagttctatact
gacttaaatgttgatggcagttttatttcccttggtgacaacacctggggtctgcgtgct
tggtacccattcgaatctatcgatgaagccacagttggtgaaaacgaagaagatgaagag
gatgatcgtccaaagaagaagcggcgtaaagtcaatgccttcctcgcagacaccgatgac
gatgacgatgtaattgactatgacaatgatgatcctgaagatgaggatcttgatactgac
gatgatgccgattctgaggatgattatgatgacgacactgatgacttcagtgacgacgat
gatgatcttgatgatggtattgaaggtcagctatcagaattacatgatgaagaagatgaa
gacgaggatgacgaataa
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