Lacticaseibacillus rhamnosus GG: LGG_01373
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Entry
LGG_01373 CDS
T00987
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lrh
Lacticaseibacillus rhamnosus GG
Pathway
lrh03030
DNA replication
lrh03430
Mismatch repair
lrh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LGG_01373 (dnaE)
03430 Mismatch repair
LGG_01373 (dnaE)
03440 Homologous recombination
LGG_01373 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrh03032
]
LGG_01373 (dnaE)
03400 DNA repair and recombination proteins [BR:
lrh03400
]
LGG_01373 (dnaE)
Enzymes [BR:
lrh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LGG_01373 (dnaE)
DNA replication proteins [BR:
lrh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LGG_01373 (dnaE)
DNA repair and recombination proteins [BR:
lrh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LGG_01373 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
CAR87268
UniProt:
A0A7S7FPT1
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All DBs
Position
1373874..1377170
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AA seq
1098 aa
AA seq
DB search
MTFTQLQVHSNYTLLHSPLALPDLIQAAKNRGYSAVALTDTNVVYGLVEFYRQAKAAGLK
PLLGMQIEIADAKLLVIAENNTGYHQLLKLSTQIMLAQQPLAFADLLPLNGLAAVTLPDS
PFGVAVSERHEDQAQTFLTTLKAKQPSSLYIGVDEEHLEGTLPAFADTVKLPLLALGNVL
YRDPTDAFTQKVMVAIEAGSQLNFRDPVLTDAGPAWLKPPTDAAKPFVQAGLQAAVTQTE
AIAARADVTIDFKQPQLPHYQTPDQTSSKDYLTKLAESGLAKRFHGQSIPPAYQDRLEYE
LRVIIEMGFADYFLVVWDVMNYAHKVNIMTGAGRGSAAGSLVSYALAITEVDPIEYNLLF
ERFLNPARAQMPDIDLDIPDNRRGELIQYVHDKYGKNHMAQIITFGTFGAKQAIRDVARV
FGLSQFESNTWSKAIPNLFHIDLKTAYEQSQPLKNLVADSPKNRMLFQTALALEGLPRHY
STHAAGIVLSEEPLTDTVALQPSGDGLEQTQVPKDDVEALGLLKMDFLGLKNLNILAAAS
HFVTRDTGKPFDPKAIPLDDQPTLALFARGDTNGVFQFESSGIKNVLRKLRPTAFEDVVA
VNALYRPGPMENIDTFIARKNGQEPIAYPDPALAKILKPTYGVLVYQEQVMQVANVMGGF
SLGEADLLRRAMSKKKSSVLAAEQDKFIEGALKQGFPEATAKTVYAYIDRFANYGFNRSH
AVAYSKVAFWLAYLKVHYPAAFFAALMNASMNNLPKLRTYVQEAKARKVGLLGPDINQSN
GGFKLSQGKIRFGLLSIKGMRRDFVEAIFAARKNGPFRDLRDLLQRLDPKWLKTDYYKAP
TLAGAFDQFSNNRAQTLANLDELINSVKLAGNDVGLFSMLAPKTIEVPEMPASERLEAEA
EVLGVYLSGHPVDKYAPLKTQYRLINVSDLEEGRAVDILLLVRHIKRIRTKTGKPMAFID
GQDATGNVSLTIFPNLYPTIENLSEDMVVLVSGRVEKRNDDLQLVVNRIQDAQPLLANLP
TAELFIRMDAKDTAMRTDLLKKLQAAHGTTPVITVDTATRESILLDKRYWVKAQTELIDA
LKTQFGANNVVLRKRQET
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttacccaattacaggttcacagcaattataccttattacacagccctttggca
ctgcctgatttgattcaggccgcaaaaaatcggggttattcagccgtggcattaactgac
accaatgttgtttatggcctagtagagttttatcggcaggcaaaagcggcggggttaaag
ccgttattagggatgcaaatcgaaattgccgatgccaagttgcttgtgattgccgaaaat
aataccggttatcatcaattgttgaaactctcaacccaaattatgcttgcccaacagccg
cttgcatttgctgatttgctgccgctgaatgggctggcagccgtaacattgcccgattca
ccttttggcgtagcagtttctgagcgtcacgaagatcaggcacagacttttctgacaacg
ttaaaagctaagcaaccaagctccttgtacattggtgtggatgaggaacatcttgaagga
acattacctgcgtttgcggacaccgtaaagttaccgttacttgctttggggaatgttttg
taccgcgaccccaccgatgcctttacgcaaaaggtgatggtggcaattgaagcaggaagt
caattaaactttcgcgatccggttttaacggatgccgggccagcgtggttaaaaccgcca
accgatgcggccaagccgtttgtgcaagccggcttgcaagcggcggtgacacagactgaa
gcaattgctgcgcgtgccgatgtgacgattgattttaaacagccccagttaccgcactat
cagacgcctgatcaaacgtcttcaaaagattatttgaccaagttggctgaatcgggtttg
gccaagcgctttcatgggcagtcgattccgccggcttatcaagatcggttggagtatgag
ctacgggtcattattgaaatgggctttgcggactattttttggttgtctgggacgtgatg
aattatgcgcacaaggtcaacattatgacaggcgccggccgtggttctgcagcaggttcc
ttagttagttatgcactagccattactgaagtcgacccgattgaatataatctgttattc
gaacgatttctcaatcctgcccgagcgcaaatgccggatatcgacttggatattcctgac
aatcggcgcggtgagttgattcagtatgttcacgacaaatatggcaagaatcatatggct
cagatcattacattcgggacttttggggccaagcaggcaattcgcgatgtcgcccgggtt
tttggcttgagtcaatttgaaagcaatacctggagtaaagctattcctaacttatttcat
attgatttgaaaaccgcgtacgaacaaagtcagccattgaaaaatctggttgccgattcg
ccaaaaaatcggatgctttttcaaacagctttggctttggaagggttgccgcggcattat
tcaacccatgcggctgggattgttttgtcagaagaaccattgactgataccgtcgcgctc
cagcctagtggcgatggactcgaacagactcaggttcccaaagacgatgtggaagcactc
ggattgttgaagatggactttttaggtttaaaaaacctcaacatcttggcagcagcaagt
catttcgtcacccgcgatacaggcaagccgtttgaccccaaggcaatcccgcttgatgat
caacccacgctggcgttatttgcgcgtggcgacacaaatggggtcttccaattcgagtca
tccggcatcaaaaacgttttacgcaaactacgaccaactgcttttgaagatgttgtagcg
gttaatgccttgtatcgtcccgggccgatggagaacattgataccttcattgcgcgcaaa
aacggtcaggagccaattgcctatccggacccagcgctggccaaaatcctaaagccgact
tatggcgtcttggtttatcaggaacaagtcatgcaggttgccaacgtcatgggtggtttc
agtcttggcgaagcggatttgcttcggcgggcgatgagtaagaagaaatcttccgttcta
gctgcggaacaggataaatttattgaaggtgcccttaagcaaggcttcccggaagcaacc
gcgaaaaccgtttacgcctatattgatcgatttgctaattatggattcaatcggtcacac
gcggtggcctatagtaaagtggcgttttggctggcttatctcaaagttcactatcctgcc
gcctttttcgcagcattgatgaacgccagcatgaacaacctgccaaagctacggacgtat
gtacaggaagctaaagcgcgcaaagtggggttacttggtccggatatcaatcaaagcaat
ggcggctttaaattgagccaaggaaagatccgctttgggttactatcaattaaaggcatg
cggcgggattttgtcgaagccatttttgccgcccgcaaaaatggaccgttcagggacctt
cgtgatttattgcaacggcttgatcctaagtggttgaaaaccgactactacaaagcacca
acgcttgctggcgcttttgaccaattcagcaataaccgtgcgcaaacgctggctaatttg
gatgagctgattaattccgttaagttagccggtaatgatgtcgggttattttcaatgtta
gcgccaaagaccattgaggttcccgagatgccggcgagcgagcgcttagaggcagaagca
gaagtgctcggggtttatctctccgggcatccggttgataagtatgccccgctaaagacc
cagtatcgccttattaatgttagcgatcttgaagaaggacgagccgttgacatcttgcta
ttagtccggcatatcaagcggattcgaaccaaaaccggtaaacccatggcatttatcgat
ggtcaggatgcgaccggtaacgtgtcattaacaatctttcccaatttgtatccaacgatc
gagaatctttcggaagacatggttgtattagtcagtggccgggtcgagaagcgcaatgat
gatttgcaattggtggtcaatcggatacaggatgcccagccattgttagccaatttgccg
accgcggaattgttcattcgcatggatgccaaggatacggcgatgcgaaccgatttactg
aaaaaactgcaagctgctcacgggacaacccccgtcattacggttgatactgccacccgc
gaaagcattttgctggataaacgttactgggtcaaggcgcagacggaactgatcgatgcg
ttaaagacacagtttggcgcgaacaatgttgtgttaagaaaacggcaggaaacctag
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integrated database retrieval system
