Leminorella richardii: NCTC12151_01308
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Entry
NCTC12151_01308 CDS
T05503
Name
(GenBank) type I restriction enzyme EcoKI subunit R
KO
K19789
DNA repair protein RadD
Organism
lri
Leminorella richardii
Brite
KEGG Orthology (KO) [BR:
lri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lri03400
]
NCTC12151_01308
DNA repair and recombination proteins [BR:
lri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
NCTC12151_01308
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
zinc_ribbon_2
AAA_30
zf-tcix
SLFN-g3_helicase
AAA_22
AAA_16
AAA
zf-ribbon_3
TniB
UPF0547
Motif
Other DBs
NCBI-ProteinID:
SQI39093
UniProt:
A0A2X4UJD4
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All DBs
Position
1:complement(1340156..1341916)
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AA seq
586 aa
AA seq
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MAFTLRPYQQEAVEATLRYFRQRQDAALIVLPTGAGKSLVIAELARLARGKVLVLAHVKE
LVAQNHAKYRAYGLEADIFSAGLNQKQSSANVVFGSVQSVARSLEAFSDSFSLLIVDECH
RISDDEDSQYQQIVSHLRSKNPKLCLLGLTATPYRLGKGWIYQYHYHGMVRGDENSLFRD
CIYELPLRYMIKHHFLVEPNRLDMPVVQYDFSRLEASSSGLFREVDLNREIKRQRRITPH
IVSQIEEYAESRKGVMIFCATVEHAKEVFGLLPTGSAALISANTPPAERDRLIDEFKHQH
LRYMVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLFPGKTDCLILDYAGNP
YDLYTPEVGGAKPKGDSQPVQVFCPACGFANTFWGKCGPSGEVIEHYGRRCQGILEDDEG
HREQCDYRFRFKSCPHCGAENDIAARRCHQCHEVLVDPDDMLKDALNLKNAKVLRCSGMT
LKRGQDDKGEWLSVTYYDEDGADVSERFRLKTPAQRTVFTQKFLLPHHKAPGVPFIWNDA
ADIISQQQKLRHPDFVVAYLQGEFWRVREKMFDYQGRYRRANELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttacgcttcgtccctatcagcaggaggccgttgaggccacgctgcgctatttt
cgtcagcgtcaggatgcggcgcttattgtgctgcccacgggcgcggggaaaagtctggtc
attgcagagctggctcggctggctcgcggcaaagtgctggtgctcgcccacgttaaagag
ctagtggcgcaaaaccacgccaagtatcgagcctacggccttgaggcggacattttctct
gctggattgaatcaaaagcagagctcagccaacgtcgtttttggcagcgttcagtctgta
gcccgtagccttgaggcctttagcgacagcttttctctattgattgtcgacgagtgtcac
cgcatcagtgacgatgaagacagtcagtatcagcagatcgtctctcacttgcgcagtaaa
aatcccaaactgtgcctgctcggattaacggcgacgccctatcgtctggggaaaggatgg
atttaccagtatcactatcacggtatggttcgcggtgatgaaaacagcctgtttcgcgac
tgtatttatgagctgccgctgcgttacatgatcaagcatcactttctggttgaacccaac
cggctggacatgcctgtcgtacagtatgacttcagtcggcttgaagccagcagcagcggc
ctgtttcgtgaagttgaccttaaccgtgaaatcaagcgtcagcggcgtattactccccat
attgtcagccagatagaagagtacgcagagagccgcaaaggcgtcatgattttctgcgcc
acggtagagcacgccaaagaggttttcgggctgcttcctacgggcagtgccgcgcttatc
agcgccaatacgccccctgctgagcgcgatcggctgattgacgaatttaagcaccagcat
ttgcggtatatggttaacgtcgcagtgctgactaccgggtttgacgctccccacgtcgat
ttaattgctattttacgccctactgaatcggtaagcctttatcagcagattgtcggtcgc
ggtctgcggctgtttccgggtaaaacagactgtctgattcttgactatgcaggcaacccc
tacgatctctatacgccagaagtcggcggagccaagcccaaaggagacagccagccggtg
caggttttctgccctgcctgtgggtttgccaacactttttggggcaaatgcggccccagc
ggcgaagtcatagaacactacggcaggcgctgtcagggcattctggaagatgacgaaggc
catcgtgaacagtgcgactaccgctttcgcttcaagagctgcccccactgtggtgcagaa
aacgacattgccgcacggcggtgccaccagtgccatgaagtgctggtcgatcctgacgat
atgctaaaagacgccctaaacctaaaaaacgccaaagtattacgctgttcgggtatgact
cttaagcgcgggcaggatgacaaaggcgaatggctcagcgtgacttactatgatgaagac
ggtgcagacgtcagcgaacggtttcggctcaaaaccccggcacagcgcacggtatttacg
cagaaattccttctgccgcaccacaaggcaccgggagttccctttatctggaacgacgcg
gcagacattatttcccagcagcaaaagcttcgccatcccgacttcgtggtggcctatcta
cagggtgagttttggcgcgtgcgggaaaaaatgttcgactatcaggggcgctatcgccga
gccaatgagctgcggggatag
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