Lethenteron reissneri (Far Eastern brook lamprey): 133346113
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Entry
133346113 CDS
T09663
Symbol
SMARCE1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133346113 (SMARCE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrj03021
]
133346113 (SMARCE1)
03036 Chromosome and associated proteins [BR:
lrj03036
]
133346113 (SMARCE1)
Transcription machinery [BR:
lrj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133346113 (SMARCE1)
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133346113 (SMARCE1)
PBAF complex
133346113 (SMARCE1)
BRITE hierarchy
Motif
Pfam:
HMG_box
HMG_box_2
DUF3138
Motif
Other DBs
NCBI-GeneID:
133346113
NCBI-ProteinID:
XP_061413507
LinkDB
All DBs
Position
23:16616558..16625075
Genome browser
AA seq
471 aa
AA seq
DB search
MSRRIPYASSPAPGVSTLSQAASTPGYVGINIYSHLAYNNYKLGGNAGSNARSMASGINV
PKAPKAPDKPLMPYMRYSRKVWDQVKAANPDLKLWEIGKIIGSMWRDLSEEDKQEYLNDY
EAEKIEYNDLMKAYHTSPTYLAYINAKTRAEAAQEEESRQRQRMEKVDPYVSIQPADDPD
DHDDGSSLKHLGASRFQRNHRLINEILSEVVVPDVRVVVTTGRMQVLKRQVDSLTVHQRK
LEAELLQIEERHLEKKRKFLENTATFNSEMKRLCGMKVEVDLERILAEMEALRRQQREEA
AAKAAAAAAATAKAAAAAASAALAAVEKSAAKPDDAPAVNGDTTEAAAEEEMETDVGEGE
KLPAQQMEKSPSSTGSATGKVTPPESPNEAVAEVAVESVKEQQTKATPSPEEEKEEQKEV
RGGKKKRADKTNLKRVEGKETKGEAANSGRRGEATGREIQNGSSSGDGDSG
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggcgcatcccgtatgcttcctctcctgccccgggtgtctcgacgctatcgcaa
gctgcgagcacaccaggatatgtgggcatcaacatttacagccacttggcttataacaac
tacaagctgggaggaaatgcaggaagcaatgcaagatccatggccagcggtatcaatgtc
ccaaaagccccaaaggctccagacaagcccctcatgccttacatgcggtacagcagaaag
gtttgggatcaggttaaagcagccaaccctgacctgaagctctgggagattgggaagatc
atcggcagcatgtggcgggacttaagtgaggaggacaagcaggaatatctcaatgactac
gaagcggaaaagatcgagtataatgacttgatgaaggcgtaccacacctcgccaacatac
ctggcctacatcaacgcgaagacgcgtgcggaagcggcacaggaggaggaaagtcgacag
aggcagcgtatggagaaggtggacccatatgtcagcatccagcctgccgatgacccagat
gatcacgatgacggatcctccttaaagcacctcggggcttcgcgcttccagcggaaccac
cgcctcatcaatgagatcctcagcgaggtcgtggtcccagatgtgcgcgtggtggtgacc
accggacggatgcaggttctcaagcgccaggtggactcgctcaccgtgcaccagaggaaa
ttggaagcagagcttcttcagatcgaggaacgccacctcgagaaaaagaggaaatttctg
gaaaacacagcaacattcaacagcgaaatgaaaaggctgtgtggcatgaaggtggaggtg
gatctggagcggatcctggcagagatggaggccctgcggcggcagcagagagaggaggct
gcagctaaggccgcagcggctgcagcagcgacagctaaggctgcagcggctgcagcgagc
gcggcacttgctgccgtggaaaaatctgcagcaaagcccgatgatgcgccagcggtcaac
ggagatacaaccgaagctgccgcagaagaggagatggagaccgacgtgggagagggagag
aaactgcctgcccaacagatggagaagagcccctcctccacaggctctgcaacggggaag
gtgactcctcccgagtcccctaatgaggccgtggccgaagtggcggtggagagcgtcaag
gagcagcagacaaaggcaacaccttcaccggaggaggagaaggaagagcagaaggaggtg
aggggagggaaaaagaaaagggccgataaaacaaatttaaaaagggtggaaggaaaggaa
acgaaaggcgaagctgccaactcggggaggaggggagaggcaacgggaagggagatacaa
aatggtagctctagcggtgacggagactcgggataa
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integrated database retrieval system
