Lethenteron reissneri (Far Eastern brook lamprey): 133347860
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Entry
133347860 CDS
T09663
Name
(RefSeq) RNA binding protein fox-1 homolog 3-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrj03041
]
133347860
Spliceosome [BR:
lrj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133347860
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
133347860
NCBI-ProteinID:
XP_061416525
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All DBs
Position
26:21520424..21826793
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AA seq
471 aa
AA seq
DB search
MADPRAVERDEGGRARSRDVKLRREDFQDSQPESKRARADEVTGPEPLQLLQPRANGEQC
GGTPWAQGGGQTGTPMALESQRAEDSKVDCSSCTGKEESEVRAQHRVTSDVQTKSTEGNQ
EPTAPPEAMAQPYGATAGQYAPPQNGLPAEYAPPPPHAHPHAHPVQDYGAQPSLPEHAMS
IYPAAQPHGDQGGAGEPPGQPVSATSTQTDDIIQTDCTQVVPAESPDGKQQPKRLHVSNI
PFRFRDPDLRQLFGQFGKILDVEIIFNERGSKGFGFVTFESSADADRAREKLHGTMVEGR
KIEVNNATARVMTNKKAVNPYANGWKLNPVVGAVYGPEIYAVAGFPYPAVGAVAAYRGAH
LRGRGRAVYNALRPAPPPPTIPAYGGVVYQDGFYGADIYGGYTAYRYAQPAAAAAAAAAY
SDSYGRVYAAAADPYHHAIGPAATYGVSTMSLQGRLQPLHALLNAREMPFQ
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccgagagccgtggagagagatgagggcggaagggcgaggagcagagacgtg
aagcttaggagggaagacttccaggactcgcagccggagagcaagcgggcacgagcggac
gaagtgaccggcccagagcccctccagctcctccagccgcgggctaacggggagcagtgc
ggggggaccccttgggcgcagggcggagggcaaacgggaacacccatggccctggagagc
caacgagcggaggactcgaaggttgactgcagcagttgtacggggaaagaagagagcgag
gtgagggcacagcaccgcgtcacatcggatgtccaaacaaagagcaccgagggcaaccag
gaacccacggcccctccggaagccatggcccagccatacggtgccacggcagggcagtac
gcaccgccgcagaacggcctccccgcggagtacgcgccgccgccgccgcacgcacacccc
cacgcccaccccgtgcaggactatggcgcccagccgtcgctgcccgagcacgccatgtcc
atctacccggccgcgcagccgcacggcgaccagggaggcgccggcgagcctccggggcag
cccgtgtcagctacctccacgcagactgacgacatcatccagacagactgcacccaggtg
gtcccagccgagagtccggacgggaagcaacagcccaagcgtctgcacgtctccaacatc
ccgttccgttttcgggaccccgacctccggcagctatttgggcaatttggtaaaatttta
gatgtggaaatcattttcaacgaaagaggatcaaagggatttggtttcgtaactttcgag
agtagtgctgatgcggacagggcgcgggagaaattacatggcacgatggtagagggccgt
aaaatagaggttaacaatgcaacggcacgagtcatgacaaacaagaaagcggtcaacccg
tacgccaacggctggaaactgaatccggtggttggagcagtctacgggcctgagatatat
gcagtggcgggctttccataccctgcggtgggggcggtggccgcgtaccggggggcccac
ctgcgaggccgaggccgggccgtctacaacgcgctacgcccagcccccccgccccccacc
atccctgcatatggaggtgttgtttaccaggatggcttttatggtgctgatatttatggt
ggttacactgcttaccggtatgcccagccggccgccgcagccgcagccgcggccgcctac
agtgacagctacggacgagtctatgcagccgccgcagacccgtatcaccacgccattggc
cctgcagccacctatggagtcagcactatgtctttacaggggaggctacaaccgcttcac
gccttactgaatgcaagagagatgcccttccagtga
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