Lethenteron reissneri (Far Eastern brook lamprey): 133350960
Help
Entry
133350960 CDS
T09663
Symbol
VIRMA
Name
(RefSeq) protein virilizer homolog isoform X1
KO
K22910
protein virilizer
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrj03019
]
133350960 (VIRMA)
Messenger RNA biogenesis [BR:
lrj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
133350960 (VIRMA)
BRITE hierarchy
Motif
Pfam:
VIR_N
Motif
Other DBs
NCBI-GeneID:
133350960
NCBI-ProteinID:
XP_061421795
LinkDB
All DBs
Position
35:complement(12912924..12968673)
Genome browser
AA seq
1948 aa
AA seq
DB search
MADPPVELLFCDSFKHGGVEQNGQVDMVQFPGPVLIQEVRVIPQGVRAHSNLPDPCAYGE
TTPRAFQLELFFSNITKPNLSVFERLGSLDYEEPSSIIFKPNNKVNTDGLVVRGWYSTLT
LAVYGVVERGLSRPHERESPPPPPPPPPHPGVQPVPYKRPQKYDEVAGREWDVEEQFVRS
PPRHQPRGPRTPPGPPPPDDDDDEVPILPVAVSRDDPNAAAAAATAAAVAAAATAIVAAA
AAAASQKEFFPAVSPDRPCSQPSEERFSEEGEPAGEEEGNTGGEDEEEEEEIEDEVVDEE
MEAEEGEEGEEGESHAAESMPDEDDEEGDGDSTSLAKLHRDDGYEQISSDEECIPDAEHG
AYKYPNFDLEHYTAEELASVPAMSYDPLDKELASLAHFSLPYLTRFEVALASIASNESKQ
QEEGSVERAEQAERLRDLLEAHEEDLERSGPKWVTALEEAPALLPEGLSWLRATAAPAHG
DALRRLVAWCRHALGLDAALVLPIAVNLRQLKGGLKLAGTLAECGADEARALVAAGVTEL
VVDLLFAEHMASSLKLGAMKALDSLVSTKEGVRSFLGDAGQAGGASGYQRLLDLILSKQT
VRVATAASAVLQKCHFYELVVEVERAVEALSEGSKEPRRRRSTEGTGTGDSDLDSSDDTD
DPESMCGGAGTGARDLDRLAMLLEEMQELLVRAPHCMLQLPIKCFPTPARITGPPERDDP
MPALFRYMHEHHFLESLALLLCTPAASLHAGVQQASRDVLAGLAATQPGLLFLGSHPEAA
GLLVRALAQLAEQPDHEDGPAPAAGGGVGAVAGGSGGGGGTGSDPALALRLAYSLQALQC
VSELFECGARVGGEGDTDNSGVLGILHSLYLMTFHPTGRAAVCHVLGLDRNLGCLIPFVD
QCCKEGQQGEVKSKKSVASNYACMLVLLAVQLSSEVAMLEHYGTPLLHLCKEDEGNAKLQ
ELSRWLEPVKDLHFEISSIPALTEYIKQNLDSLTIHVAHEGPGLATALRVLKHIACPPPP
IKGQQKDLRWNLAVIQLFSADALDLFIRVLQKLSAVLLQAWRHHAGAMASLQRSLVLSIA
TCALSLLQAMLAELLGGGPQGGGFELRDSRLPAALVSLHTVLCSVPLSGQLEAEEQQVQT
LAVDTLLAFTQGVGEQAAGSGDTLASNTWSLMLREVLDCTLAAPESFYSGLLLLTELLPL
PLPMHAAEPLSAQDVTTALNTRKLWSLHLRAQADTLAELMSVQAATGCQPLQMLLRRVAV
QLADLAAVPALMVLRAALQLLHSQLTASESVSCLCSPLVARVLGFLDALVAHASCKAAFL
SIVSGSVKGDERLTEVLPAMLAILRAPVDGSVHQQQAQDCVSSILQSLCDQDISLCPSVS
GEGSAASQDSPLLLLAANNNVPCRDALAPACDALLELLGRGGEPAGRGLLCGLRALALLA
EHSYGLYHVRCALRKHPHALFGVVRGVALAAMREAPALAEHTTALLSALLELLRPLLGAE
HTGHEEAEGEEHEGSSAEATATAGATAGAAAWVMSVAEARQQFRWGEPLGVEHPLVQLEK
LVTVKATTDQGKEEEGLLEGLLEGMSALRRTLDSPAGALPLPPADSDVPPEPTLPPPESL
QQMFTSRTVFVLTESPDERFTSSPFLSSSQVEDMDLEMDMVRVDLLELAEKTCNNWDLRE
ELETALLREPSSPGGASRATKSAAKLGKRKHETFITSSGKSDYLEPAKRAHMSAAPRGRG
RGSFSGLGRMNDIFRLRKQNTSRPPSMHVDDFVAVGSPVGILPTPPMVKRLPKGMPKGPL
RGSFSGGRGGGRGSSFHQPGRFFNPPINKGTYGRREGGRGSSWVSQALPRGGYVDTRGVQ
GGFPRTPPVRTPPTGYRPAPRDRAPRGRGNLGVVPWGSGGGGGGGGGGGGGGGGGSGGGG
SGGGGNNLRGKFVGRGGGGGRHIRSFTR
NT seq
5847 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccccccggtggagcttctcttctgtgactccttcaagcacgggggagtcgag
caaaatgggcaggtggacatggtccagttccccgggcctgtgctcattcaggaggtgcgc
gtcatcccgcagggcgtccgcgcacacagcaacctgccggacccctgcgcttatggggag
accacgccacgtgcgtttcagctggaactatttttcagcaacatcaccaaaccgaatctg
tcagtgttcgagaggctcggaagccttgattatgaggagccttcatccatcatatttaag
ccgaacaataaggtgaacactgatgggctggtggtgcgcggttggtacagcactctcacg
ctggccgtctacggggtggtggagaggggcctctcccgcccccacgagcgagagtctccc
cccccaccacccccacccccgccgcatcctggggttcaaccggtgccctacaagcggcca
cagaagtacgacgaagtcgcaggccgagagtgggacgtggaggagcagtttgtgcggagc
cctccccgccaccagccccgcgggcccaggaccccccctggtcctcctcctcctgacgac
gatgacgatgaggtgcccatccttccagtcgccgtctcgcgggatgatccgaacgccgcc
gcggccgccgccaccgcggctgccgtggccgccgccgccaccgccatcgtcgccgcggcc
gccgccgccgcctcccagaaggagttcttcccggcggtgtccccggatcggccgtgctcc
cagccgtcggaggagcgcttctcggaggagggagagcccgccggcgaggaggagggcaac
acgggtggggaggacgaggaggaggaggaagagatcgaggacgaggtggtggacgaggag
atggaggccgaggagggcgaggagggggaggaaggggagagccacgcggcggagagcatg
cccgacgaggacgatgaggagggagatggagacagtacgagcctggcgaagcttcatcgg
gacgatgggtacgagcagatatcgagtgatgaggagtgcatccctgacgcggagcacgga
gcgtataagtacccgaactttgacctggagcactacacagcagaggagctcgcatccgtg
cccgccatgtcctacgaccctctggacaaggagctggcgtcgctcgcacacttcagcctc
ccctacctcacccggttcgaggtggccctggcgagcatcgcctccaacgaatccaagcag
caggaggaagggagcgtggagcgtgcggagcaagcggagcgcctgcgggacttgctggag
gcccacgaggaggacctggagcgcagcggccccaagtgggtgacggcgctggaggaggcg
ccggcgctgctgcccgaggggctgagctggttgcgagcgaccgccgccccggcccacggc
gacgcgctgcgccgcctcgtggcgtggtgccggcacgccctgggcctggacgccgccctc
gtcctccccatcgccgtcaacttgcgtcagctcaagggcggcctcaagctggccggcacc
ctggccgagtgcggcgccgacgaggcgcgggcgctggtggcggccggcgtgaccgagctg
gtggtggacctcctgtttgccgagcacatggcctcctcgctgaagctgggtgccatgaag
gccctggacagcctggtgagcaccaaggagggcgtgcggagtttcctgggcgacgcgggc
caggcgggcggcgccagcggttaccagaggctgctggacctcatcctgtcgaagcagacg
gtgcgcgtggcgacggccgctagcgccgtgctgcagaagtgccacttctacgagctggtg
gtggaggtggagcgcgcggtcgaggccctttcggagggctccaaggagccgcggcggagg
cgcagcactgaggggaccggcacgggcgacagcgacctggacagctccgacgacacggac
gaccccgagtcgatgtgcggtggggccggcaccggtgcacgtgacctggaccgcctggcc
atgctgctggaggagatgcaggagttgttggtgcgagcgccgcactgcatgctgcagctg
cccatcaagtgcttcccaacgcccgcacgcatcaccggaccgccggaacgtgacgatccc
atgcccgcgctcttccggtacatgcacgagcaccacttcctggagtcgctggcgctgctg
ctgtgcacgccggctgccagcctgcacgccggcgtccagcaggcgagccgcgacgtgctc
gccggcctggccgccacgcagcccggccttcttttcctcggctcgcaccccgaggcggcc
ggcttgctggtgcgcgcgctggcacagctagccgagcagccggatcacgaagacggaccc
gcgccggcggccggcggaggggtcggcgccgtcgccggcggcagcggcggcggtggcggg
accggcagcgaccccgcgctggcgctgagactggcttacagcctgcaggcgctgcagtgc
gtgtcggagctgttcgagtgcggcgcgcgggtgggcggcgagggcgacacggacaactcg
ggcgtgctgggcatcctgcactccctctacctcatgaccttccaccccacgggccgcgcc
gctgtctgccacgtgctcggcctcgacaggaacctgggctgcctcatcccgttcgtggat
cagtgctgcaaggagggacagcagggcgaggtgaaatccaagaagtccgtggcgtccaac
tacgcgtgcatgctggtgctgctggcggtgcagctgtccagcgaggtggccatgctggag
cactacggcacgccactgctgcacctgtgcaaggaagacgagggcaacgccaagttgcag
gagctgagcaggtggctggagccggtgaaggacctgcactttgagatatcttccattccc
gcactcacggagtacatcaaacagaacctggacagtctaacgatccacgttgcccatgag
gggccgggcctggccacggcactgagggtcctcaagcacatcgcctgccctcccccgccc
atcaaagggcagcagaaggacctgcgctggaacctcgccgtgatccagctcttctcggcc
gacgctctcgacctcttcatccgcgtgctgcagaagctgagcgccgtgctgctgcaggcg
tggcgccaccacgccggcgccatggccagcctgcagcgcagcctggtgctctccatcgcc
acgtgcgccctctcgctgctgcaggccatgctggccgagctgctgggcggcgggcctcaa
ggtggcggcttcgagctgcgcgactcgcggctgccggcggcgctggtgtcgttgcacacg
gtgctgtgctcggtgccactgtcgggccagctggaggccgaggagcagcaagtgcagacg
ctggccgtggacaccctgctggccttcacgcagggcgtgggcgagcaggcggccggctcg
ggcgacacgctcgcctccaacacgtggtcgctcatgctgcgcgaggtgctcgactgcacc
ttggcggcgcccgagagcttctactcgggcctgctgctgctcaccgagctgctgcccctg
ccgctgcccatgcacgccgcggagcccctgtcggcgcaggatgtgacgacggcgctgaac
acgcgcaagctgtggagcctgcacctgcgggcgcaggcggacacgctggccgagctgatg
tcggtacaggcggccaccggctgccagccgctgcagatgctgctgcgccgcgtggccgta
cagctggccgacctggccgcggtgccagcgctcatggtgctgcgagcagcactgcagttg
ctgcactctcagctcaccgccagtgagagcgtgagttgtctgtgctcgccgctggtcgcc
cgtgttctcggcttcctggacgcactggtagcacacgcgtcctgcaaggcagcattcctc
agcatcgtgtcggggagcgtgaagggggacgagcgtctgaccgaggtgctacccgcaatg
ctcgccatcctacgggcgccagtcgacggttccgtgcaccagcagcaggcgcaggactgc
gtttcctccatcctgcagtcgctgtgcgatcaggacatcagcctttgcccgagcgtctcg
ggtgaaggctcagccgcgagccaggactctccgctcctcctcctcgccgctaacaacaac
gtgccctgccgcgacgcgttggcccccgcttgcgacgcgctgctggagctgctgggccgc
ggcggagagcccgccggccgcggcctgctatgcggcctgcgggccctcgcgctgctcgcc
gagcacagctacggcctctaccatgtccgctgcgccctgcggaagcacccccacgcgctg
ttcggggtggtgcgcggcgtggcgctggccgcaatgcgggaggcgccggcgctggcggag
cacacgaccgcgctgctctccgccctgctggagctgctgcgcccgctgctgggagccgag
catacggggcacgaggaggcggagggcgaggagcacgaggggagctctgctgaggcgacg
gcaacggcgggggccacagcgggcgccgcggcgtgggtgatgagcgtcgccgaggcgagg
cagcaattccgctggggggagccgctcggggtggaacaccctctcgtccagctggagaaa
ctcgtcacggtaaaggcaactacggaccagggcaaggaggaggaggggctgctggagggg
ctgctggaggggatgtcggcgctgcgccgcaccctcgactcgcccgccggggccctgccg
ctgccgccggcggactccgacgtgccgccggagcccacgctgcctccgcccgagagcctg
cagcagatgttcacctccaggaccgtatttgtgctgacggaatctccggacgagcgattc
acctcgtcgcctttcctctcctcctcgcaagtggaggacatggacctggagatggacatg
gtgcgtgttgatctcctagagctggcagagaagacgtgcaacaactgggacctgcgcgag
gagctggagacggcgctgctgcgtgagccctcctccccggggggcgccagccgcgccacc
aagagcgccgccaagcttggcaagcgcaaacacgagacgttcatcacctccagcgggaag
tccgactacctggagccggccaagagggcccacatgtcagcggcgccgcgtggccgaggc
cgtgggtcgttctccggccttggccgcatgaacgacattttccggctgcgcaagcagaac
acgagccgcccgccgtccatgcacgtggacgactttgtggccgtgggctcccccgtgggt
atcctgcccacgccgcccatggtgaagcgactacccaaggggatgcccaaggggcctctg
cgcggcagcttctccgggggcagggggggtggccggggcagcagcttccaccagccaggc
cgcttcttcaaccctcccatcaacaaagggacgtacgggcggcgagagggcggccgtggc
tccagctgggtgtcgcaggcgctcccgcgagggggctacgtggacacgcggggggtgcag
ggtggcttcccccgaacgccgcctgtcaggacgccccccaccggctaccggccggctcca
cgtgaccgggccccacggggtcgtggtaacctgggcgtggtgccgtggggcagtggtggc
ggcggcggcggcggcggtggtggcggtggtggcggtggcggcggcagtggcggtggcggc
agcggcggcggtggcaacaacctgcgcggcaagtttgtgggacgaggaggtggcggaggc
agacacatccgctccttcactcgataa
DBGET
integrated database retrieval system
