Lethenteron reissneri (Far Eastern brook lamprey): 133355079
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Entry
133355079 CDS
T09663
Name
(RefSeq) general transcription factor IIH subunit 2-like isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03022
Basal transcription factors
lrj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133355079
09124 Replication and repair
03420 Nucleotide excision repair
133355079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrj03021
]
133355079
03400 DNA repair and recombination proteins [BR:
lrj03400
]
133355079
Transcription machinery [BR:
lrj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
133355079
DNA repair and recombination proteins [BR:
lrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
133355079
BRITE hierarchy
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
133355079
NCBI-ProteinID:
XP_061428353
LinkDB
All DBs
Position
50:complement(2261326..2278420)
Genome browser
AA seq
375 aa
AA seq
DB search
MMEEEPERAKRWEGDYERTWEVLKEDESGSLKASVDDLIFQAKRRKVSEFHGQVRLGMMR
HLFVVVDMSRGMEDQDLKPNRLTCSLKLLEHFVEEYFYQNPISQVGLITTKNKRAEKLTE
LGGTPKKHITALKKATQSTCLGEPSLYNSLQLAMETLKHMPSHTSREILVVFGSLTTCDP
ANIYDLIQTLKAGKVRVSIIGLSAEVHVCTALTKETGGSYHVILDESHFKELLLYHVTPP
PVSANMDSSLIRMGSWRVRRRRSQVLSVGGFFCPQCRAKYCELPVECKVCGLTLVSAPHL
ARSYHHLFPLDAFQEQPLDKFTGQRVCEGCQVQLKENSVFMCSLCARPFCLDCDLFIHET
LHCCPGCVHSDKQNT
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagaggagccggaacgggccaaacgctgggagggagattatgaaagaacttgg
gaggtgctcaaagaggatgagtcggggtccctcaaggcgagcgtggacgatctcatcttc
caagccaagcgccgcaaagtctctgaatttcatggacaagtgcggcttgggatgatgcgg
catctgttcgtagtggtggatatgtcgcggggcatggaagaccaagacctgaagcccaat
cgtctcacctgttctctcaagctgctggagcactttgtggaggagtacttctatcagaat
cccatcagccaggtcggattgattacgacaaaaaataaaagggcggagaagttgaccgaa
cttggaggtacacccaagaagcacattacggctcttaagaaagccacccagtcaacatgc
ctgggagaaccgtctctctacaactcgctgcagctggctatggagaccctgaaacatatg
cccagccacacgagtcgcgaaatcctggtggtgttcggcagcctcaccacatgcgatcca
gccaacatctacgacctcattcagaccttaaaggcggggaaggtgcgtgtgtccatcatc
ggactctctgcggaagtgcacgtctgcacggctcttacgaaagagaccggagggtcgtac
cacgtcattttggacgagtcccacttcaaggagctgctgctataccacgtgacgccccct
cctgtcagcgccaacatggactcttccttaatccgcatgggcagctggagagtcagaagg
agaagaagccaggtgctgtccgtaggaggcttcttctgccctcagtgccgggccaagtac
tgcgagctgcccgtggagtgcaaagtgtgcggcctcacactggtgtcggcgccgcacctg
gcgcgctcctaccaccacctgttcccgctcgacgccttccaggagcagccgcttgacaag
tttacgggacagcgggtgtgcgaaggatgtcaagtacagctgaaagaaaacagtgtgttc
atgtgctctttgtgcgcgagaccgttctgcctcgactgcgatctcttcattcacgagacc
ctgcactgctgccccggctgcgtgcactccgacaagcagaacacctaa
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