Lethenteron reissneri (Far Eastern brook lamprey): 133357736
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Entry
133357736 CDS
T09663
Name
(RefSeq) protocadherin Fat 4-like
KO
K16669
protocadherin Fat 4
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lrj04515
]
133357736
Cell adhesion molecules [BR:
lrj04515
]
Cadherins
Cadherin related
133357736
BRITE hierarchy
Motif
Pfam:
Cadherin
Laminin_G_1
Laminin_G_2
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
133357736
NCBI-ProteinID:
XP_061431814
LinkDB
All DBs
Position
59:complement(6391670..6458549)
Genome browser
AA seq
3016 aa
AA seq
DB search
MNEWTVAVTRGSFEEFHSEPRRLSLATPMGSRSPLTWLAALLLMPLLLVCRCACQTGGGD
GRAAVSLARFERRAFVFTVPEDSAPGSTVGTVSAASPEPGLLADFSLADDDDAGGDTFLV
DRRSGAIRLLRSLDREARPFYALTLSVTAVPAGDSRNPPSGGGDGGESGVASGSSAPLGN
PPDASAGDGDTPRVVGNAGNSDGSGTLARVYVSVLDVNDNAPAFASSRLEVEVCEDVALG
AAVVSLNASDPDEGENAALDFEITSGDPERRFSVDARGVLRVARPLDRESRPSHDLLVTA
ADRAAPPAPRFTATAAVLVRVLDANDNGPAIVALRVSGRGLVPREEPAEGGAWPAFTLTV
PEDVAPGSTVATVVALDPDEGENAEVEFSLSWSRPEVRDHDRRRRSRSAARDGVIRTSAD
LDRESNLTSAASSGRYELMVLASDRAGTQAAATPQPPPVGRPCRRRRGAPVGRGLRTRVL
NGRVRYRIVPRRQRHELCARDDCAGTGAEGSRRGDTEENDDDEEEERDDDAAFRIDPVTG
ELRVARGLDRERRDAYRLVVEARDGGSPAPLASAVAVAVSVTDVNDRVPSFGSDGVVAGV
PEGLGGPPPPRLQLSARDDDLGPAGVVSYAVVGGDYERDAFSLSASGRLDLLRPLDREAR
PRHLLLVTATDAGSPPLTGTATLTVLVGDANDNAPRFPGRDVRLQVEEGAAAGTVLWTAR
AEDPDEGPNGTVTYRLEGGEGALEIDAATGELRTLAPLDRESRDGYPLLVWATDGGARTG
GALSTSVSVLVTVTDVNDNGPAFLNAPYVASVPTPTPSGALIFVPTAVDADYGANASLRF
SLSGDDAHLLALDPSLGSLSAAAPLRGPADFTVHLAATELAPPHRSAATTITVRFRDAAS
FPRPRVRLRSPPPIALPEDAPAGTTVAGVEAETSRPGAAPVWFYAAGGGDGPFEVERASG
AVSLARPLDFEERASVAVFVECRDAGFPPFSSYVRVDVAVTDVNDNVPRFERDPVTCQVP
ENSPAGPIPGCVLQASDADAGPGGAVRYSLTPPPGGLPAFAVDPASGQLSTLHPLDRETG
ATHELLALAEDGDGVTAAAVIAVTVLDADDNPPRFPRIFTGAVPEDAAPGTVVLRTWAED
EDEGDNAAMSYSLVPTATPAPFSVEPETGVVRVAAPLDREAAGGRRHALRLLARGAAFAV
NTDVVVVVTDVNDNAPAFVGVPSSPLAVPECLLEGGCLVARVAAADPDDGENGEVFYSLG
GDNDILEEFCVDASTGEISTRGRLLLPRPPTSALLGHRVLLTLVASDRGRPEPLTSETTL
AVDLVYANEHPPVFSAPLYVTTVATSAPVGSRVLRVSASDDRDLGPAAEVVFSIVDGNGS
AGPTLFTVDPAGGWLTLRSALRGRAGTTLSLAVRAQDRGLPRPLSAEAAVLMRVVEDGWA
ARGPAFARAEFVATVPECTPLGSAVLLAVAEAAEDAAGPPLVYSLLGAGAAPFSVDAGVV
RLAAPLDFEMTRSYRYVVSARDGWGSAAATAAVTVTVADCNDNTPAFERAEYRAELSEAA
PAGTFVAEVHARDADGDGDGTPRYSLADPALPFAVDADTGVVVTAGRLDYEARPRYRFAV
IAADGLPGAAARLSGTALVRVELLDENEFPPRFSTAGFVHRVSETAAPGTHVGAVSATDR
DAGRAGRVEFHLVGAESAARRHGLGLDSLSGEVVVVGRLASGSAPSSAVPDSPLDTVARV
TLTVVAKNPGAVTSAERLDEATVTVIITDANEAPRFSRDVYRARVREDAPPGTPVIAVMA
HDPDRVPQFARFSFRLGDDPAPAAVPASRPAFAIDAASGLVTSASPLDRETRDAYALLVL
AVDEGSPAATGTALLRVDVDDANDNAPALTSVRWRVDEGRPPGTPVARLSGRDADAEENG
PPFSYRLARPSRFFTLSGDGVLRTTAKLDREETGEVALAVAVSDSGTPRLTSVVEITVEV
GDVNDNAPSPRRLDILVSFFGTTFPGGFLGDVRPIDLDSDDEFTCRIVGTAEGTDPSSAP
PPWPSTSLVQSPPSSASSQSRSPSHLSPSSSGAFSITPGTCDLLSEPLDCHGTPAMVVLW
VEASDGLHAPVLNAARLRFAPYDGASLAGAALLSLGCTELGRFLDTGLAPLLASASALLS
SVGADLRMLHAFRHGNASYAWAALARTDGGDGSDGRGFCARDARRFLQALSARDPKPDPN
ARLGGSFEVVADACRLSDCVAPARCTSRGPAVGPGLLAVAESETFVLVSDGAAGPPWTCE
CPPGAAAAPECDGETRGAGAGAATLTTGAPVENGAAAEGAAADGAAVGETVVEEEGSGAT
CEEQGFGFQGSSFMEFPARILDPERNEIRLEVATTRTSAQLLLLARDDGGRWCLSMWLMG
GRASVSLDLGGEVITVEAGQGLSDGNYHTIAALRRGKTLSVHVDDCEHSGEVQDVDHCQA
AGTIAGNSSIIWPLSNGSVSVGGVDSTATLPGALGKRQGRPRGLDGCLRGVSVDALPLAP
WGARRTTAVADTCPLAGRDLLPAESGPGDGGPAPWLLATVTAVPLLSALLAAAAVGAALA
LLARRRRHPKAPGSAAVASAAGPAESAAERLACEKPAPKGGSVNEAFVHDGGTVRLSRPD
IIVEQTESRPYAIVDERALRPAAPRQLQHGRMFAVGRQLDEEDDEDEEDGTVRRGGHHVR
PEHYDLENASSIAASDADVEMHYRTLRARGADTTMGRRPQHRHPPLHHHHHQQQQQLDKE
ELYHRHCLYCSQDCLSQKPDTCHSICQCHHRPLHPPLPHLEKQCTDDSLHRRRTNHNLVG
QEPPLAKRPGATSSQSHAGDTSSSSSLCRCNRDSWPRSPINGASLLSDRLDVLAGLASAG
DLSRHRAAGRQLATPCGGVAGARRSEEFPLRATAATTTATFGQRRPSPDAVASFAPPSRL
SREEVARLGVRPPPPPSPPGEGGDGEGGESPGRARERRRVEAEESGSEARTDSPSPDGSF
TGSEMEFEFRHRPSES
NT seq
9051 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaatggacggtggcggtcacaagaggctcgtttgaggagttccacagcgaacct
cgtcgcctctcgctcgccacgccgatggggagccgctcgccgctcacctggctcgccgct
ctgctgctgatgccgctgctgctggtgtgccgctgcgcgtgccagacgggcggaggcgat
gggcgggcggccgtgtccctggcgcggttcgagcggcgggcgttcgtcttcacggtgccc
gaggactcggccccaggcagcactgtgggcactgtgtcagccgcgtcgccagagccgggg
cttctcgcggatttctcgctcgcggatgacgacgacgcggggggggacacgttcctcgtg
gaccggcgcagcggcgccatccgcctgctccgctcgctcgaccgcgaggctcgccccttt
tacgcgctcacgctcagcgtcaccgccgttcccgccggggactcgcggaaccccccgagc
ggcggcggcgatggcggcgaatcgggggtcgcttccgggagctcggcaccgctggggaat
ccgcccgacgcttctgccggcgacggagacaccccccgagtcgtcggcaacgctgggaat
tccgacggcagcgggacgctcgcgcgggtctacgtcagcgtgctcgacgtcaacgataac
gcgccggcgttcgcgagctcgcggctggaggtggaagtgtgcgaggacgtggcgctggga
gccgccgtcgtcagcctcaacgccagcgacccagacgaaggggaaaacgcggcgctggat
ttcgagatcacgtcgggcgaccccgagcgccgtttctccgtggacgcccgcggggtcctc
cgtgtggcccggccgctggaccgcgagtcgcggccctcccacgatctcctcgtgacggcc
gcggaccgagcggcccccccagccccccgtttcaccgccacggccgccgtcctcgtccgg
gtcctcgacgccaacgacaacgggccggccatcgtggccctgcgggtgtccggccgcgga
ttggtcccacgggaggagccggcggaaggcggggcctggccggccttcacgctgaccgtg
ccggaggacgtggcccctgggtccacggtggccaccgtcgtcgcattggacccagacgaa
ggagagaatgcggaggtggagttctccctgtcgtggtcgcggccggaggtgagggatcac
gaccgccgccgccgttcacgatcggcagctcgcgacggcgtcatccgcacgtcggctgac
ctcgaccgggagtcgaacctgacgtcggcggcgtcctcggggcgctacgagctgatggtg
ctcgcgagcgaccgggcgggcacgcaggcggcggcgacgccgcagccgccaccggtagga
cgcccgtgtcggcgccgtcgtggcgcacctgtcggccgcggactgcggacgcgggtcctc
aacggacgggtccgataccggatcgtgccgcgtcgacagcgacacgagctctgtgcgcgc
gacgactgcgccgggaccggagcggagggctcacgccgcggggacacggaagagaacgac
gacgacgaagaggaggagcgggacgacgacgccgcgttccgtatcgacccggtgacggga
gagctgcgagtcgctcgcggcctggaccgcgagcgcagggacgcgtaccgcctcgtcgtg
gaggcgcgcgacgggggctcgccggcgccgctcgcttccgccgtcgccgtggcggtctcc
gtcactgacgtcaacgaccgcgtcccgtcgttcgggagcgacggcgtcgtggccggggtc
ccggagggccttggcggccccccccccccccgtctacagctgtcggcgcgcgacgacgac
ctgggcccggcgggcgtggtgtcgtacgccgtggtagggggagactacgagcgcgacgca
ttctcactgtcggcctcggggaggctcgacctgctgcgcccgctcgatcgcgaggcacgg
ccccgccacctgctgctcgtcacggccaccgacgccggctccccgcctctcaccggcacc
gccacgctcactgtgctcgtgggcgatgccaacgacaatgctccgcgcttcccgggccgc
gacgtgcgcctgcaggtggaggagggtgccgcggccggcaccgtgctgtggacggcgcga
gcggaggacccggacgagggccctaacggcaccgtcacgtaccgcctggaagggggtgag
ggggccctcgagatcgatgccgcgacgggcgagctgcggacgctcgcgccactcgaccgc
gagtcgcgcgacggctacccgctgctcgtgtgggccacggacgggggtgcccgcaccggc
ggcgccctctccacgtccgtctccgtgctcgtcaccgtcacggacgtcaacgacaatggg
ccggcgttcctcaacgcgccgtacgtggcgagcgtccccacgccaacgccgagcggcgcc
ctcatcttcgtccccaccgccgtcgacgccgactatggcgccaacgcgtccctgcgcttc
tcgctgtcgggcgacgatgctcacctcctggcgctcgatccctcgctgggctcgctgagc
gccgccgcaccgctccgcggccccgccgacttcaccgtgcacctcgcggccaccgagctc
gcccctccgcaccgcagcgccgccaccaccatcacggtccgcttccgggacgcggcctcg
ttcccgcgtccccgcgtgcgccttcggtcgccgccgcccatcgcgctgccggaagacgcg
ccggcggggacgaccgtggccggggtggaggccgagacatcccggcccggcgcggccccc
gtgtggttctacgcggcgggcggaggggacggcccgttcgaggtggagcgggcgagcggg
gccgtgtcgctggctaggccgctggacttcgaggagcgggcgagcgtggccgtgttcgtg
gagtgccgcgacgcgggcttcccgccgttctccagctacgtgagggtggacgtggccgtc
acggacgtcaacgacaacgtgccgcgcttcgagcgcgaccccgtcacgtgccaggtcccg
gagaactctcccgcgggccccatcccgggctgtgtcctgcaagcgtccgacgctgacgcc
ggccccggcggcgccgtgcgctactcgctcacgccgcccccgggcggcctcccggccttc
gccgtcgaccccgccagcgggcagctcagcaccctgcacccactggaccgcgagacgggc
gccacgcacgagctgctggcgctggcggaggacggcgacggcgtcaccgccgccgccgtc
atcgcggtgacggtgctcgatgcggacgacaaccccccgcgcttcccgcgcatcttcacc
ggcgcggtgccggaggacgccgccccggggacggtcgtgctgcgcacatgggccgaggac
gaggacgagggtgacaatgccgccatgtcctactccctggtgccgacggcgacgccggcg
ccgttctccgtcgagccggaaaccggcgtggtgcgggtggccgcgccgctcgaccgggag
gctgcggggggcaggcggcacgcgctgcgcctgctggcgcgcggcgccgcgttcgcggtc
aacacggacgtggtggtggtcgtgacggacgtcaacgacaatgcgccggcgttcgtcggg
gtgccgtcatcaccgctggcagtgcccgagtgcctgctggagggtggctgcctggtggcg
cgcgtggccgcggcggaccccgacgatggggagaacggggaggtgttttactcgctcggc
ggcgacaacgacatcctggaggaattctgcgtcgatgcctccacgggcgagatctcgacg
cgcggccgcctcctcctgccgcgacccccgacctcggccctcctcggccaccgtgtcctc
ctgacgctcgtggcctcggaccgcggccgccccgagccgctcacctccgagacgacgctc
gccgtggacctcgtctacgccaacgagcacccgcccgtcttctcggcaccgctctacgtc
accaccgtggcgacctcagcacccgtcggctcccgcgtgctccgcgtctcagcttctgac
gaccgcgacctcggccccgccgccgaagtcgttttctccatcgtcgacggaaatggcagc
gccgggcctacgctgttcacggtggaccctgccggcgggtggctgacgctccgctctgcg
ttgcgcggtcgcgctggcaccaccctctcgctcgccgtgcgggcgcaggaccgcggcctg
ccgcggccgctctccgctgaggcagcggtgctcatgagggtcgtcgaggatggctgggca
gcccgggggccggcgttcgcgagagccgagttcgttgccaccgtgcccgagtgcacaccg
ctcggctccgcggtgctgctcgcggtggcggaggcggcggaggacgcggccgggccgccg
ctggtctactcgctgttgggcgccggcgcggcgcccttctcggtggatgccggcgtcgtg
cgcctggccgcgccgctcgacttcgagatgacccgctcctatcggtacgtcgtgtcggcg
cgcgacggctgggggagcgccgccgccacggccgcagttaccgtgaccgtcgccgactgc
aacgacaacacgccggcattcgaacgtgctgagtaccgcgccgagctgagcgaggccgcg
ccggcggggacgttcgtggcagaggtgcacgcacgcgacgccgacggcgatggtgacggc
accccgcgctactcgctggccgaccccgcgctgccgttcgccgtcgacgcggacaccggc
gtcgtcgtcacggcggggcggctcgactacgaggcgcggcctcgctaccgcttcgcggtg
atcgctgcggatgggctgcccggtgcagcggcgcggctgagcggcacggcgctggtgcgc
gtcgagttgctcgacgagaatgagttcccgccgaggttttccaccgccggcttcgtgcac
cgcgtctccgagacggccgcaccgggcactcacgtcggcgccgtctcagccaccgaccgt
gacgccgggcgcgccgggcgggtggagttccacctcgtgggcgccgagtcggcggcgcgg
aggcacggcctggggttggactcgctctcgggcgaggtggtcgtggtggggaggctcgcg
tccggctcggcaccctcttccgccgtcccagactccccactggacaccgtggctcgcgtg
actctgaccgtggtcgccaaaaaccccggcgccgtgacgagcgccgagcggctggacgag
gcgacggtgacggtgatcattacggatgccaacgaggcgccccgcttctcgcgcgatgtc
taccgggcgcgagtgcgcgaggacgcccccccggggacgcccgtgatcgccgtgatggct
cacgatcccgaccgcgtcccgcaattcgctcgcttctccttccggctcggcgacgatccg
gcgccggcggcggtgccggcgtcgcgcccggcgttcgccatcgacgcggcctcgggcctc
gtgacgtcggcgtcgccgctcgaccgggagacgcgggacgcctacgcgctgctcgtcctc
gccgtggacgaggggagccccgcggccacgggcacggcgctcctgcgggtcgacgtcgac
gacgccaacgacaacgcgcccgcgctgacgtccgtccggtggcgcgtcgacgagggccgt
ccgcccggcacgcccgtggcccggctgagcggccgcgacgccgacgccgaggagaacggg
ccgcctttttcctaccgcctggcgcggccgtcgcggttcttcaccctgagcggcgacggg
gtgttgcgcacgaccgccaagctggaccgcgaggagacgggggaggtggcgctcgcggtg
gcggtgtccgactcggggacgccccggctcacgtcggtggtggagatcacggtggaggtg
ggcgacgtgaacgacaacgcgccttcaccgcgccgcctcgacatcctcgtcagcttcttt
ggtacgaccttccccggtggtttcctcggagacgtgcggccgatcgaccttgactcggat
gacgaattcacgtgccggatcgtggggaccgcagagggcaccgatccatcgtcggcgccg
ccgccgtggccatccacgtccttggttcagtcgccgccgtcgtccgcatcgtcgcaatcg
cggtcaccatctcatttgtcgccgtcgtcatccggagctttcagcatcacgccaggtacg
tgcgacctgctgtctgagccgctcgactgccacggcacgccggcgatggtcgtgctgtgg
gtggaggcgagcgacggcctccacgcgcccgtgctgaacgccgcgcgcctgcgctttgcg
ccctacgacggcgcctccctcgctggcgccgcgctcctctcgctcggctgcacggagctc
ggccgctttctcgacaccggcctcgcaccgctccttgcctccgcctcggcgctgctgagt
tccgtcggagcggacctgcgcatgctccacgcgtttcgccacgggaacgcctcctacgcc
tgggcggcgctcgccagaaccgacggcggcgacggcagcgacggacgcggcttttgcgcc
cgcgacgctcggaggttcctgcaggccttgtcggcccgggacccaaagccggacccaaac
gccaggctcgggggctcgttcgaggtggtggccgacgcgtgccgcctgtcggactgcgtg
gcgccggcgcgctgcacgagccggggtccggccgtgggccccggcctcctcgccgtcgcc
gagagcgagacgttcgtcctagtgtcggacggcgccgccggccctccgtggacgtgcgag
tgcccgccgggggccgccgcggctcccgagtgcgacggggagacgcggggggcgggcgcg
ggcgccgcgacactgacaacgggggcgcccgtggagaatggggcggctgcggagggggcg
gccgcagacggagcggccgtaggggagacggttgtggaggaggaggggagcggagcgacc
tgcgaggagcaggggttcggcttccagggctcctcattcatggaattcccggcgcggatt
ctggacccggagaggaatgagattcggctggaggtggcaacgacgcggacaagtgcacag
ctgctcctgctcgcccgcgacgacggaggacgttggtgtctgtccatgtggctcatggga
ggtcgcgcttccgtctcgcttgacctcggtggagaggtcatcaccgtggaggcagggcaa
ggcctaagcgacggaaactaccacaccattgctgccctgcgtcgtggaaagaccctgagt
gtgcacgtagatgactgtgaacattcaggcgaggtgcaggatgtggaccactgccaggcc
gcagggaccatcgcgggcaactccagcatcatctggccgcttagcaatggctcagtgagc
gttgggggggtggactccacggcgacgctgcccggggccctcggcaagcgccaggggcgt
ccgcggggcctggacgggtgcctgcgcggagtcagcgtggacgcgctgcctcttgcaccg
tggggggctcgcagaaccacggccgtcgctgacacgtgtccgcttgcgggccgtgacctc
ctccctgcggagagcggtcccggagatggcggcccggcgccgtggctgctggcgaccgtc
accgccgtgccgctgctctctgctctcctggcggctgcagcggtgggtgcggcgctggcg
ctgcttgcccggcgccgccgccatcccaaggctccgggctccgcagcggtggcgtcggcg
gccggcccggcagagtcggcggcggaacgcctggcgtgcgaaaagccggcgccgaagggc
ggcagcgtgaacgaggcgttcgtgcatgacggcgggacggtgcgcctgagccggcccgac
atcatcgtggagcagaccgagagccggccttacgccatcgtcgacgagcgggccctacgc
cctgccgctccccggcagcttcagcacgggagaatgttcgccgtggggcggcagctggat
gaggaggacgatgaggatgaggaggatgggacggtgagaaggggcggccaccacgtccgg
cccgagcactacgacctggagaacgcgagcagcatcgccgcgtccgacgcggacgtggag
atgcactaccggacgctgcgtgcgcgtggggcagacaccacgatgggccgtcgtccacaa
catcgtcatccacctctgcatcatcatcatcatcagcagcagcagcagctggataaagaa
gagctttatcacaggcactgtctttattgctctcaggattgcctcagtcagaaacccgac
acctgtcactctatctgtcagtgtcaccatcgccctcttcatcctcctcttccccatctc
gagaagcagtgcactgacgacagtctgcatcgtcgacggacgaaccacaacctcgtcggc
caggaaccaccccttgccaagcgaccaggtgccacttcgtcccagagccacgctggtgac
acctcttcctcctcctctctctgccgctgcaaccgtgactcgtggccacggtcgcccata
aacggcgcgtcactcctttcggaccgcttggacgtcctcgccggtttggccagcgcgggg
gatctgtcgcgacacagggcggccggccgccagctggcgacaccctgcggcggggtcgcc
ggcgcgagacgctcggaggagtttcccttgcgggccacggcggcgacgacgacggcgaca
tttggccagcggcgcccctccccggatgccgtggcctcgttcgcgccgccctcgcgactc
tcccgcgaggaggtggcgcggctcggcgtgcgacccccaccgccaccgagcccgcccgga
gaggggggagacggcgagggcggcgagagccccggccgcgcgcgggagcggcggcgcgtg
gaagcggaggaatcgggctcggaggcgcgcaccgacagcccgtcccccgatggatccttc
accggatccgagatggagttcgagttcaggcaccgcccgagcgaaagttga
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