KEGG   Ligilactobacillus ruminis: LRC_10190
Entry
LRC_10190         CDS       T01626                                 
Symbol
cas1
Name
(GenBank) CRISPR-associated protein cas1
  KO
K15342  CRISP-associated protein Cas1
Organism
lrm  Ligilactobacillus ruminis
Brite
KEGG Orthology (KO) [BR:lrm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lrm03400]
    LRC_10190 (cas1)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lrm02048]
    LRC_10190 (cas1)
DNA repair and recombination proteins [BR:lrm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     LRC_10190 (cas1)
Prokaryotic defense system [BR:lrm02048]
 CRISPR-Cas system
  Universal Cas proteins
   LRC_10190 (cas1)
SSDB
Motif
Pfam: Cas_Cas1
Other DBs
NCBI-ProteinID: AEN78294
UniProt: G2SNY1
LinkDB
Position
complement(1069101..1070090)
AA seq 329 aa
MQSYYLFSSGTLFRKDNSIRIQRDDGEYKDLKIEVTRDIYLFGEITLNSKCLNYLSRNRI
PVHLFNFYGFYTGSFYPRETNVSGTLLVNQVMAFEDKYTRLRLAKKFVEGASYNILRNLK
YYSRRGKDLEEQISRITMLEKDIAKSDTIKELMGLEGNIHREYYSAWQTIFDNKVNFSSR
VRRPPDNMVNTLISFLNMMVYSTCLSEIYVTQLNPTVSYLHSPDERRFSLCLDISEVFKP
LIVDRLIFSLINKKQVSEKDFEKGSNGCYMKKSALKKVTKAYDDYLNKTLRHRSLGRNVS
YRHLIRLECYKVIKDLMDDVEYSPFKIWW
NT seq 990 nt   +upstreamnt  +downstreamnt
atgcaaagttattatttgttttctagtggcacattatttagaaaagacaattcaattaga
attcagcgtgatgatggcgaatataaagatttgaaaattgaagttactagggacatatat
ctatttggagagatcacattaaatagtaagtgcctgaattatttatcccgaaatagaata
ccggtgcatctttttaacttttacggtttttatacgggttctttttatcctagagaaaca
aatgtgtctggaactttgttggtcaaccaggttatggcttttgaggataaatatactagg
cttagattagcaaagaaatttgtggagggtgcttcatataatattttaaggaatttgaag
tattattcgcgtaggggcaaggatttggaggaacaaattagtagaataactatgttggaa
aaggatattgctaaatccgatactataaaggaacttatggggttagagggaaatatacat
cgtgaatactatagcgcttggcagactatatttgataataaggtgaatttctcttctaga
gtcagaaggcctccggataatatggttaatactttaatttctttcttgaatatgatggtt
tacagtacgtgtctgagcgaaatatatgttactcagctcaatcctactgttagttatttg
catagtcctgacgaaaggagattttctttgtgtttagatatttctgaagtttttaaacca
ttgatagtagatagactgatattttcgttgataaataaaaaacaggtttcagagaaagat
tttgaaaagggatctaatggttgttatatgaaaaagagtgcactcaaaaaggtaactaaa
gcgtacgatgattatcttaataaaactttacggcatcggagcttgggaagaaacgtatca
tataggcatctgatacgcttagagtgctataaagttattaaagatttgatggatgatgtt
gaatattctccttttaaaatttggtggtga

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