Lactococcus raffinolactis: CMV25_05650
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Entry
CMV25_05650 CDS
T05231
Name
(GenBank) IS3 family transposase
KO
K07497
putative transposase
Organism
lrn
Lactococcus raffinolactis
Brite
KEGG Orthology (KO) [BR:
lrn00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
CMV25_05650
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Gene cluster
GFIT
Motif
Pfam:
rve
HTH_Tnp_1
rve_3
HTH_21
rve_2
DDE_Tnp_IS240
HTH_23
HTH_28
HTH_17
HTH_29
HTH_Tnp_1_2
HTH_Tnp_IS630
Terminase_5
Ribosomal_L20
Sigma70_r4_2
HTH_30
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ATC62381
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Position
complement(join(1129305..1130200,1130200..1130452))
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AA seq
382 aa
AA seq
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MARRKFDKQFKNSAVKLILEEGYSVKEVSQELEVHANSLYRWVQEVEEYGESAFPGNGTA
LADAQHKIKLLEKENRYLQEELELFKKVPGLLEAKQVKRFEFLLKHHGKIKIKHAVKVLK
VSRSGFYEYMHRRPSKQQVEREVLSEKIKSVFHEHKGRYGAVRITKVLHNTGILTNTKRV
GKLMHLMGLYAKGSRYKYKHYNRKGASLSRPNLINQIFKATAPNKVWLGDMTYIPTKEGT
LYLAVNIDVFSRKIVGWSMSSRMQDKLVMDCFLQACGKEHPQPGLIVHTDQGSQYTSSRY
QSILRQVGAQSSMSRKGNPYDNAMMESFYKTLKRELINDAHFETRAEATQEIFKYIETYY
NTKRMHSALDYKSPKDFEKYNS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaagaaaattcgataaacaatttaaaaattctgcagtaaaactcattcttgaa
gagggttactctgttaaagaagtcagccaagagcttgaggttcatgccaatagtctttat
cgctgggttcaagaagttgaagaatatggagaaagtgcttttccaggcaatgggacagcc
ctagctgatgcccaacataagattaaattgttagagaaggaaaatcgttatcttcaggag
gaacttgaactttttaaaaaagttccgggtcttcttgaagcgaagcaagtaaaacgtttt
gaatttctcttgaaacatcatgggaagataaaaattaagcatgcagtaaaagttcttaag
gtttctcgctcaggtttctatgaatacatgcatcgtcgtccttcaaaacaacaagtggaa
cgagaagtcctctctgagaaaataaaatctgtctttcatgagcataaaggacgctatggt
gcggttagaattaccaaggtacttcataatactggtattttgaccaacacgaaacgtgtt
ggaaaactgatgcacttgatgggactttatgctaagggaagccgttataaatataaacat
tacaacagaaaaggagcttcgctttcaagaccaaatttaattaatcagatctttaaagca
acagctcctaataaagtatggctgggagacatgacctatatccctaccaaagaaggcacc
ttatacttagccgtgaatattgacgttttttcacgtaaaattgtaggatggtcaatgtct
tcaaggatgcaagacaaactggttatggattgcttcttacaagcttgtgggaaagaacat
ccccagcctggattgattgtacatactgatcaagggagtcaatatacaagctctcgttat
cagtccatccttcgtcaagtcggtgctcaatctagcatgagtcgtaaaggaaatccctat
gataatgcaatgatggagtctttttataagacactaaagagggagcttattaatgatgct
cattttgagacaagagctgaggctactcaagaaatttttaaatacattgagacctattac
aatacaaaaaggatgcattcagctcttgattacaagtctccaaaagactttgaaaaatat
aattcttaa
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